Gene YPK_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3187 
Symbol 
ID6087751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3485243 
End bp3486205 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content27% 
IMG OID641598264 
Productglycosyl transferase family protein 
Protein accessionYP_001721909 
Protein GI170025404 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.225557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAA TGGTTAGTAT TTGTATTCCT AGCTTGAACA GAAGTGTTTA TCTATTAAAA 
ACATTGAAAT CTATATATGA ACAAGAATCA CATAATTTAT GTTTTGAAGT ATGTATTTCT
AATAATGCAT CAACAGATGA CTATTCAATA ATCGAGGAAT ATGTAGAAAA GATAAAAGAA
TCACATGGGA ATGTAATTTA TATTTCTCAT GAAAAACAAA TTCCAATAGA TGAGCATCAT
CATTATGTTA CTAATATGGC AAGAGGCGAT TATATATATT TCCTCGGTGA TGATGATTGC
TTTTATCCTG ATGCTTTTAA TAAGATATCG AAACTTCTAG AAGAAAATGA TTTAGATTTG
GCCATTTTCA ATGGGGCTAA AATTGATGAG AATAATAAGT TTATTGGCCG TGTGTTATCT
CTGCCTGATA AAAAATATGA AGATCTAGAG TCGGCGTTTT TGGATCTTAA AGATAAGTCA
CCTTTTGGTG CTATTCTTGT TAAAAAAGAA TATTTGTCTA ACAATTATTT TAAATTATTA
TATGGAACAT CTCATGCATA TTGTTGTTTT TGGTTGAATA TGATGAATCA TAAAGAATGG
TTTTTTACAA TTATTATTCC GGATTTTAGG TGTGTGCAGT TAAGAAGACT AAAAAAGAAT
TATAGTAGAG TTGATGTTTT TTATCATGAG ATTGCTTTTT ATATAGAAAC ATTTTATGCG
AATGTTAACT CTGATAAAGC TAAAGAAATC ATCCGAATAT TTAGAGAAGA ACACAATAAA
AAGATATATA GTATACCATT TATGGCTTAT ATGCTTTATC ACGGAACTAA ACTCTCTCAA
TTAAAAAACT CTTCACCAGG AAAACCATTT TTCTTTTTTA AAAAGTTAAT TTCTAGAATT
CTAGCAATTA ATCCCATATA TGATTTTGCT CACTCTTTTT ATTTTAAAAT TATAAAAAAA
TAA
 
Protein sequence
MIKMVSICIP SLNRSVYLLK TLKSIYEQES HNLCFEVCIS NNASTDDYSI IEEYVEKIKE 
SHGNVIYISH EKQIPIDEHH HYVTNMARGD YIYFLGDDDC FYPDAFNKIS KLLEENDLDL
AIFNGAKIDE NNKFIGRVLS LPDKKYEDLE SAFLDLKDKS PFGAILVKKE YLSNNYFKLL
YGTSHAYCCF WLNMMNHKEW FFTIIIPDFR CVQLRRLKKN YSRVDVFYHE IAFYIETFYA
NVNSDKAKEI IRIFREEHNK KIYSIPFMAY MLYHGTKLSQ LKNSSPGKPF FFFKKLISRI
LAINPIYDFA HSFYFKIIKK