Gene YPK_3163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3163 
Symbol 
ID6090721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3458706 
End bp3459155 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content50% 
IMG OID641598242 
Producthypothetical protein 
Protein accessionYP_001721887 
Protein GI170025382 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGG AAATTGCAGT AAATCCAAAT TGGTTTTGGC TATCACTTGG CGGGCTATTA 
TTGGCCGCTG AGATGCTGGG AGCGAGTGGC TATCTGTTGT GGAGCGGTAT TGCCGCCGTC
CTTGTTGGCG TTCTGGTATG GCTGTTCCCC TTTAGCTGGG AAATGCAAGG CGTGCTGTTC
TCCATTCTGA CTGTCGTGTC TGCTTTCCTA TGGTGGTATT GGTTGAGTAA ACGCACTAAA
CCGCAACCTG CCATGCTTAA CCAACGTAAT CATCAACTGC TTGGCATACG GGCAACATTG
ACCGAGCCAA CGGTTGATGG CTATGGCCGG ATGAAAGTCG GTGACAGCAG TTGGCGAATT
TACTGCGCTA CCGAGCTTAA CCCAGGTACT GAAGTTGAAG TTATTTTGGT AGAAGGTAAT
ACCTTGCATG TCCGTGCCGT TAATCGCTAG
 
Protein sequence
MLEEIAVNPN WFWLSLGGLL LAAEMLGASG YLLWSGIAAV LVGVLVWLFP FSWEMQGVLF 
SILTVVSAFL WWYWLSKRTK PQPAMLNQRN HQLLGIRATL TEPTVDGYGR MKVGDSSWRI
YCATELNPGT EVEVILVEGN TLHVRAVNR