| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3069 |
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| Symbol | |
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| ID | 6091066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3373914 |
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| End bp | 3374786 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641598147 |
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| Product | 23S rRNA pseudouridine synthase F |
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| Protein accession | YP_001721793 |
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| Protein GI | 170025288 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGACTA ACTCATCCAT TCGTCTGAAC AAATACATTA GCGAGAGCGG CATCTGTTCT
CGCCGCGATG GCGATCGCTA CATTGAACAG GGCAATGTTT TTATTAACGG TAAGCGAGCC
ACTGTTGGCG ATCAGGTATT TGCCGGAGAT GTCGTGAAAG TTAACGGTCA GATTATTGAG
CCGCGTGATG AAGAAGACTT GGTGTTTATC GCGCTGAATA AGCCCGCCGG TATCATCACC
ACGATGGAAG AGGGTGAGCG GGATAACATC AGTGATTTTG TTAACCACAG CAAGCGTGTC
TTTCCTATCG GGCGGTTGGA TAAGGATTCC CAAGGGCTGA TTTTTCTGAC GAATCACGGC
GATCTGGTTA ACAAGATCCT CCGCGCCGGA AATAATCACG AGAAAGAGTA CGTGGTCACC
GTTAATAAAC CGGTGACCGA TGAGTTTATC CAAGGCATGA GCGCGGGTGT ACCGATCTTG
GGAACGGTGA CCAAAAAGTG CAAAGTGCAG AAAGAAGCCC CCTTGGTGTT TCGTATCACG
CTGGTGCAGG GGCTTAACCG CCAGATTCGC CGCATGTGTA AACACTTTGG TTATGAAGTC
ACTAAACTTG AACGCACGCG CATCATGAAC ATCAGCTTGA AAGGGCTGCC ACTGGGCGAG
TGGCGAGACT TGACCGACGA TGAACTGCTC ACGCTATTTA AGCTGATTGA AAACTCCTCT
TCCGAAGAAA AAACGGTAAA AAAAGCGCCA CCTAAGCCTG TAGCCGCTAA AAGACCGGGT
ATTCAGGGGC AGAAAAAAGC CGAAAAATCC GACGACAACA CCGCTTCCCG CAAGCGCTTT
ACCCAACCTG GGCGTAAGAA GAAAGGGCGC TAA
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| Protein sequence | MLTNSSIRLN KYISESGICS RRDGDRYIEQ GNVFINGKRA TVGDQVFAGD VVKVNGQIIE
PRDEEDLVFI ALNKPAGIIT TMEEGERDNI SDFVNHSKRV FPIGRLDKDS QGLIFLTNHG
DLVNKILRAG NNHEKEYVVT VNKPVTDEFI QGMSAGVPIL GTVTKKCKVQ KEAPLVFRIT
LVQGLNRQIR RMCKHFGYEV TKLERTRIMN ISLKGLPLGE WRDLTDDELL TLFKLIENSS
SEEKTVKKAP PKPVAAKRPG IQGQKKAEKS DDNTASRKRF TQPGRKKKGR
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