Gene YPK_2964 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2964 
Symbol 
ID6088179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3260267 
End bp3261835 
Gene Length1569 bp 
Protein Length522 aa 
Translation table11 
GC content47% 
IMG OID641598039 
Productcytochrome bd ubiquinol oxidase subunit I 
Protein accessionYP_001721691 
Protein GI170025186 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA TTGTCGAACT GTCACGGTTA CAGTTTGCCT TAACGGCAAT GTACCATTTC 
CTTTTTGTCC CATTAACGCT CGGTCTGGCG TTTCTGTTGG CAATTATGGA ATCGGTTTAT
GTGCTGTCTG GTAAACAAAT CTATAAAGAT ATGACCAAAT TCTGGGGTAA GTTATTTGCT
ATTAACTTTG CTCTGGGGGT TGCCACTGGT TTAACTATGG AGTTCCAGTT TGGGACTAAC
TGGTCATATT TCTCTCATTA CGTCGGTGAT ATCTTCGGGG CCCCTCTGGC TATCGAAGGT
TTAATGGCGT TCTTCCTGGA ATCTACGTTT GTCGGTCTAT TCTTCTTCGG ATGGGATCGT
CTGACTAAGC ATCAGCATTT AGCTGTAACT TGGCTAGTTG CGTTAGGTTC TAACTTCTCT
GCATTGTGGA TCTTGGTTGC GAATGGTTGG ATGCAAAACC CGATTGCATC TGATTTCAAC
TTTGAAACCA TGCGTATGGA AATGCTGAGC TTCTCAGAAT TAGTTCTGAA CCCGGTTGCT
CAGGTGAAAT TCGTTCATAC CGTCGCTGCA GGTTATGTTA CCGGCGCGAT GTTTATCTTG
GGTATCAGTT CTTACTATCT GTTGAAAGGA CGTGATATTC CCTTTGCCAA GCGTTCTTTT
GCGATTGCTG CAAGTTTTGG TCTGGCCTCC GTATTGTCTG TTATCGTCCT GGGTGATGAG
TCCGGTTACG AAATGGGTGA CGTACAGAAA ACCAAGTTAG CCGCAATTGA AGCTGAATGG
GAAACTCAGC CGCCTCCAGC AGCCTTTACG CTGTTTGCGA TCCCTAACCA GGAAACCATG
GAGAACCGGT TCGCCATTCA GATTCCATAT GCATTAGGAT TGATCGCGAC CCGTTCACTG
GATACCCCGG TTATCGGTTT GCGTGACTTG ATGTCGCAAC ATGAAGTGCG TATTCGTAAC
GGTATCCAGG CGTATAGTTT GTTAGAACAG TTACGTGGTG GTAACACTGA CCCTGCTGTA
CGTGATGCAT TCAATAAAGC GAAGCAGGAT CTTGGTTACG GCATGTTGCT TAAGCGTTAT
ACGGAAAACG TAGCTGATGC GACTGAAGAA CAAATTCAGT TAGCTGCTCA AGACTCTATT
CCGCGCGTAC TGCCGCTTTA TTTCGCCTTC CGCATCATGG TGGCCTGTGG CTTCCTGATG
TTGCTGATTA TTGGGCTGGC GTTCTATAAC GTGGTTCGTG GCCGGATTGG TGAGAAAAAA
TGGCTTCTGC GTGCCGCATT GTATGGTATT CCGTTGCCGT GGATTGCCGT AGAAGCAGGC
TGGTTTGTGG CCGAGTATGG CCGTCAACCT TGGGCCATCG GTGAAGTATT GCCGACAGCA
GTCGCCAACT CATCAGTCAC TGCCGGGGAA ATACTGTTCT CGATGGCGTT GATTTGCGGT
TTGTATACGC TGTTCCTGAT TGCAGAAATG TACCTGATGT TCAAATTTGC GCGCCTTGGG
CCTAGCAGCC TGAAAACTGG CCGCTATCAT TTTGAACAGC CGACTGCCCC AGTGCAGGAA
GCACGGTAA
 
Protein sequence
MFDIVELSRL QFALTAMYHF LFVPLTLGLA FLLAIMESVY VLSGKQIYKD MTKFWGKLFA 
INFALGVATG LTMEFQFGTN WSYFSHYVGD IFGAPLAIEG LMAFFLESTF VGLFFFGWDR
LTKHQHLAVT WLVALGSNFS ALWILVANGW MQNPIASDFN FETMRMEMLS FSELVLNPVA
QVKFVHTVAA GYVTGAMFIL GISSYYLLKG RDIPFAKRSF AIAASFGLAS VLSVIVLGDE
SGYEMGDVQK TKLAAIEAEW ETQPPPAAFT LFAIPNQETM ENRFAIQIPY ALGLIATRSL
DTPVIGLRDL MSQHEVRIRN GIQAYSLLEQ LRGGNTDPAV RDAFNKAKQD LGYGMLLKRY
TENVADATEE QIQLAAQDSI PRVLPLYFAF RIMVACGFLM LLIIGLAFYN VVRGRIGEKK
WLLRAALYGI PLPWIAVEAG WFVAEYGRQP WAIGEVLPTA VANSSVTAGE ILFSMALICG
LYTLFLIAEM YLMFKFARLG PSSLKTGRYH FEQPTAPVQE AR