| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2959 |
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| Symbol | |
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| ID | 6088050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3257470 |
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| End bp | 3258147 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641598034 |
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| Product | colicin uptake protein TolQ |
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| Protein accession | YP_001721686 |
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| Protein GI | 170025181 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0410151 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC TGGATTTATT CCTGCAGGCA AGCCTATTCG TTAAGCTTAT CATGCTGGTT
CTGATGGGCT TTTCTATTGC GTCATGGGCT ATCATCATTC AACGAACGCG AATTCTGAAT
GCGGCTACCC GCGATGCTGA AGCCTTCGAA GATAAGTTTT GGTCCGGCAT TGAGCTTTCT
CGCTTGTATC AGGAAAGTCA GGCTCGTCGC GATACACTTA GCGGCTCAGA GCAGATCTTC
CATTCTGGTT TCAAAGAGTT TGCCCGTCTA CATCGTGCAA ACAGCCATGC ACCAGAAGCG
GTGATTGACG GTGCTTCCCG TGCGATGCGC ATTTCAATGA ACCGCGAGTT AGAAGCGTTG
GAAACTCATA TTCCGTTCCT CGGTACTGTC GGTTCAATCA GCCCGTATAT CGGTCTGTTT
GGTACCGTAT GGGGGATTAT GCATGCCTTT ATTTCTCTGG GCGCCGTCAA ACAGGCGACA
TTACAGATGG TAGCACCGGG TATTGCAGAA GCCCTGATTG CGACAGCGAT CGGCCTGTTT
GCTGCTATTC CTGCTGTTAT GGCCTATAAC CGTCTGAATC AGCATGTGAA TAAGCTTGAA
CAAAACTATG ACAACTTCAT GGAAGAGTTC ATTGCTATTC TGCATCGCCA GGCTTTCGCC
AGCACCGAAA GCAAATAA
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| Protein sequence | MNILDLFLQA SLFVKLIMLV LMGFSIASWA IIIQRTRILN AATRDAEAFE DKFWSGIELS
RLYQESQARR DTLSGSEQIF HSGFKEFARL HRANSHAPEA VIDGASRAMR ISMNRELEAL
ETHIPFLGTV GSISPYIGLF GTVWGIMHAF ISLGAVKQAT LQMVAPGIAE ALIATAIGLF
AAIPAVMAYN RLNQHVNKLE QNYDNFMEEF IAILHRQAFA STESK
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