Gene YPK_2918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2918 
Symbol 
ID6089382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3217139 
End bp3217849 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID641597987 
Producthypothetical protein 
Protein accessionYP_001721645 
Protein GI170025140 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.117943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCGCT ATCCACGCTC TAATGGTTCG ATTGTCGAAC GTGCCGGCTC AGGCATTCAG 
GCCTATATGG CGCAGGTATA CGGTTGGATG ACCTGTGGCT TGTTATTAAC CGCAGTTGTC
GCTTGGTATG CCGCGAACAC TCCTTCAATC ATTTTTGCTT TGCAATCAAA CCAAATATTG
TTCTTTGGCT TGATTATTGC CCAGCTTGGT CTGGTTTTTG TTATTTCCGG TATGGTTAAC
CGCCTGAGTG GAACCGCAGC AACATCACTG TTTATGCTGT ATTCCGCGCT GACCGGCCTC
ACCCTTTCCA GCATATTGAT AATGTACACG GGCGCGTCTA TCGCCAGTAC TTTCGTTATT
TGTGCCGGGA TGTTTGGTGC CATGAGCTTC TATGGTTACA CCACCAAACG TGATCTGAGC
GGCATGGGTA GCATGTTGTT TATGGGCCTG ATCGGTATCA TTCTGGCATC TCTTGTTAAC
ATCTGGCTGA AAAGCCCAGC GTTGATGTGG GCTGTGACCT ATATCGGTGT GCTCGTGTTT
GTGGGCCTGA CTGCCTACGA CACACAGAAA CTGAAAAACT TGGGCGCACA GTTGGATGTC
AATGATAAAG ATTCATTCCG CAAATACTCC ATTGTGGGCG CACTGACTCT GTATCTCGAT
TTCATTAACC TGTTCTTGAT GTTATTACGA ATCTTCGGTA ATCGTCGCTA A
 
Protein sequence
MDRYPRSNGS IVERAGSGIQ AYMAQVYGWM TCGLLLTAVV AWYAANTPSI IFALQSNQIL 
FFGLIIAQLG LVFVISGMVN RLSGTAATSL FMLYSALTGL TLSSILIMYT GASIASTFVI
CAGMFGAMSF YGYTTKRDLS GMGSMLFMGL IGIILASLVN IWLKSPALMW AVTYIGVLVF
VGLTAYDTQK LKNLGAQLDV NDKDSFRKYS IVGALTLYLD FINLFLMLLR IFGNRR