Gene YPK_2774 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2774 
Symbol 
ID6087419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3061746 
End bp3062561 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content58% 
IMG OID641597843 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001721504 
Protein GI170024999 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[I] Lipid transport and metabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGACC ACAAAAAGCG GTCTGATCTC GAAAAGCGGC CTGATCTCGA AAAACAGTCT 
TATCCCGAAA AACAGAGCCT GTCTGGGAAG CGGGCGCTGG TGACTGGTGC AGGTCAGGGG
ATCGGGGCGG CAATCGCTGA AGGGCTGGCG GCAACCGGTG CGGAAGTGAT CTGCACCGAT
ATTTCACGTG AACGCGCTGC AGCAACCGCA CAAGCACTGA ACGCCAAGGG CTACAACGTG
CGGGCCGAGG AACTGGACGT TACCGACAGC GCGGCTATTG ACGCTCTGGC CGCCGCGTTA
CCGCCATTGG ACGTGCTGGT CTGCAATGCC GGGATCGTGA CCCATACCCC GGCTGAAGAG
ATGACCGACG CGGACTGGGA TAAGGTCATC GCCGTCAACT TGACTGGCGT GTTTCGCACC
TGTCGTGGCT TTGGCCGCCG GATGCTTGAA GCGGGGCGCG GCTCGATCAT CAATATCGGT
TCGATATCGG GCCAAATCGT TAATGTGCCG CAGCCCCAGT GCCACTACAA TGCATCGAAG
GCGGGAGTAC ACCATTTGAC CAAATCACTG GCGGTGGAGT GGGCCACACG TGGCGTTCGC
GTCAATGCCG TCGCCCCCAC CTATATAGAA ACACCACTGA TACAAGGGTT GACCAGCCAG
CCGGGGCGGG TATCGCGATG GCTCGATATG ACCCCCATGG GGCGGTTAGG CAGCCCCCAT
GAAATTGCTT CTGTGGTGCA GTTTTTGGCT TCGGAGGCCT CCAGCTTGCT GACAGGTTCA
ATCATTACTG CCGATGCGGG ATATACCAGC ATCTGA
 
Protein sequence
MNDHKKRSDL EKRPDLEKQS YPEKQSLSGK RALVTGAGQG IGAAIAEGLA ATGAEVICTD 
ISRERAAATA QALNAKGYNV RAEELDVTDS AAIDALAAAL PPLDVLVCNA GIVTHTPAEE
MTDADWDKVI AVNLTGVFRT CRGFGRRMLE AGRGSIINIG SISGQIVNVP QPQCHYNASK
AGVHHLTKSL AVEWATRGVR VNAVAPTYIE TPLIQGLTSQ PGRVSRWLDM TPMGRLGSPH
EIASVVQFLA SEASSLLTGS IITADAGYTS I