| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2730 |
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| Symbol | |
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| ID | 6089200 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 3010480 |
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| End bp | 3011589 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641597799 |
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| Product | putrescine transporter subunit: periplasmic-binding component of ABC superfamily |
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| Protein accession | YP_001721460 |
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| Protein GI | 170024955 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCACCC AACGTAAAAA GTGGTTATCG GGTGTTGCTG CCGGTCTGTT AATGGCCGCG
TCCGTCTCAG CATCTGCTGA AGAGAAGATA TTGCACATTT ACAACTGGTC CGATTATATC
GCTCCGGATA CGCTGGCTAA TTTCCAAAAG GAAACCGGCA TTAAGGTTGT TTATGATGTG
TTTGACTCTA ATGAGGTGTT GGAAGGGAAA TTAATGGCGG GGAGCACAGG GTTTGATTTG
GTGGTGCCAT CAGCCAGTTT CCTTGAGCGT CAATTGTCAG CCGGTGTCTT TAAGCCACTG
GATAAAAGCA AGTTACCGAA TGAGAAAAAT CTCGACCCCG AGTTACTGGC GCTGGTCAGC
AAGCACGATC CCGATAATAA ATATGCCATT CCTTATCTCT GGGCCACGAC CGGTATCGGC
TATAACGTCG AGAAAGTGAA GGCAGTGCTA GGAGAAGATG CGCCAGTCAA TAGCTGGGAT
TTGGTGCTGA AACCCGAAAA TCTTGAGAAG CTGAAAAGTT GTGGTGTCTC CTTCCTGGAT
GCGCCGAGCG AAATTTTCGC CACGGTACTC AACTATTTAG GTAAAGATCC GAACAGTACA
CTCACTGCCG ATTACACGGG CTCCGCGACG GATTTATTGC TGAAGTTGCG GCCAAATATC
CGCTATTTCC ACTCGTCACA ATACATTAAT GATCTGGCGA ACGGGGATAT CTGTGTCGCT
GTGGGTTGGG CCGGCGATAT CATGCAAGCC TCTAATCGTG CCAAAGAAGC GAAGAATGGG
GTGAATGTGG CTTACAGTAT TCCGAAGGAA GGCGCCTTAG CGTTCTTTGA TGTGTTTGCG
ATGCCAACTG ACGCTAAAAA TCAGGATGAA GCTTACCAGT TCCTTAATTA CCTGATGCGC
CCTGATGTGA TTGCGAATAT CAGTAACCAC GTGTTCTACG CGAACGCCAA CCAAGCGGCT
ACACCGTTGG TGAACGCAGA GGTTCGTGAT AATCCAGGGA TTTACCCGCC AGCGGATGTA
CGTGCCAAAA TGTTTACGCT AAAAGTGCAG GATCCGAAAA TTGACCGGGT CATCACCCGG
GCCTGGACAA AAGTTAAAAG CGGTAAATAA
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| Protein sequence | MFTQRKKWLS GVAAGLLMAA SVSASAEEKI LHIYNWSDYI APDTLANFQK ETGIKVVYDV
FDSNEVLEGK LMAGSTGFDL VVPSASFLER QLSAGVFKPL DKSKLPNEKN LDPELLALVS
KHDPDNKYAI PYLWATTGIG YNVEKVKAVL GEDAPVNSWD LVLKPENLEK LKSCGVSFLD
APSEIFATVL NYLGKDPNST LTADYTGSAT DLLLKLRPNI RYFHSSQYIN DLANGDICVA
VGWAGDIMQA SNRAKEAKNG VNVAYSIPKE GALAFFDVFA MPTDAKNQDE AYQFLNYLMR
PDVIANISNH VFYANANQAA TPLVNAEVRD NPGIYPPADV RAKMFTLKVQ DPKIDRVITR
AWTKVKSGK
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