Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2688 |
Symbol | |
ID | 6087629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2966867 |
End bp | 2968633 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641597757 |
Product | cysteine/glutathione ABC transporter membrane/ATP-binding component |
Protein accession | YP_001721418 |
Protein GI | 170024913 |
COG category | [C] Energy production and conversion [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.311685 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAGA CAAGGCAGTA TGAGTTGATT CGTTGGCTGA AAAAACAAAG CGCCCCCGCG CAACGTTGGC TCCGCCTATC CATGTTACTC GGCCTGCTTA GTGGGCTATT GATTATCGCT CAGGCATGGT TGTTAGCCAC CCTGCTGCAA TCTCTCATTA TCGACGAATT ACCCCGTGCG ACACTGACCA CCGAGTTCTC CCTGCTGGCA GGCGCATTTG CCTTGCGTGC GGTGATCAGT TGGCTGCGTG AGCGGGTGGG GTTTATTTGT GGTATGCGTG TGCGCCAGCA GATCCGCAAA GTGGTGTTAG ACCGGCTAGA ACAGTTGGGG CCATCGTGGG TAAAAGGTAA ACCTGCCGGG AGTTGGGCAA CAATAATTCT GGAACAAATT GAAGATATGC AGGAGTACTA CTCACGCTAT CTACCACAAA TGTATCTGGC AGTATTTATC CCGGTCCTGA TCTTAATTGC TGTCTTCCCC ATCAATTGGG CCGCGGGCTT GATCTTGTTT GTCACCGCCC CCCTGATCCC CATATTCATG ATATTGGTCG GGATGGGAGC CGCAGATGCT AACCGGCGTA ATTTTGTCGC ATTGGCAAGA TTGAGCGGTA ACTTCCTTGA CCGCTTGCGT GGGCTGGATA CGCTACGTTT GTTTAACCGC GCCAAAGCAG AAACCGACCA AATCCGTGAC TCTTCGGAGG ATTTTCGCAG CCGAACCATG GAAGTGCTGC GTATGGCCTT CCTCTCTTCT GCTGTATTGG AATTTTTTGC CGCCATCTCC ATTGCCGTAG TTGCCGTCTA TTTTGGTTTT TCCTATTTAG GGGAACTGAA TTTTGGTAGC TATGGCCTCG GCGTAACGCT GTTTGCCGGT TTTTTGGTGC TAATACTGGC GCCTGAATTC TTCCAACCCC TTCGAGACTT AGGGACGTTC TATCACGCGA AAGCACAAGC TGTCGGTGCG GCTGAATCGT TAGTGACGTT TTTAAGCAGC GAGGGAGAAG CCATTGGTCA AGGCGAGAAA CAACTAGACG GTAAAGAGGC CATCGCCCTT GAGGCGAATG AGTTGGAGAT CCTGGCACCC AATGGTACCC GTTTAGCCGG GCCACTTAAT TTCTCACTGC CAGCAGGCAA ACGGGTTGCC ATTGTGGGTC AGAGCGGCGC GGGGAAAAGT TCGTTGCTCA ATCTATTGTT GGGTTTTTTG CCTTATCGCG GATCGCTAAA AGTTAACGGT ATCGAATTAC GTGAACTGGA ACCCCAAGTC TGGCGTAGTC AGTTAAGTTG GGTAGGCCAA AATCCACATC TACCGGAACA AACGCTGGCC ACCAATATTT TACTGAGGCA ACCGGATGCA AGTGAGCACC AACTGCAACA GGCGGTGGAG CGGGCTTATA TCAATGAATT TTTGAAGGAT TTACCTCAAG GGCTGAATAC TGAAATTGGC GATCATTCGG CACGTCTTTC GGTTGGGCAA GCTCAACGAA TTGCCGTCGC CAGAGCATTA TTAAACCCAT GTCGTTTATT GTTGTTGGAT GAGCCTACCG CCAGCCTTGA TGCCCACAGT GAGCAGTTGG TGATGAAAGC GCTGGAGGAG GCCTCCCGTG CGCAGTCTAC CCTGCTGGTC ACTCATCAGT TGGAGGACAC CCTGGGTTAT GATCAAATCT GGGTAATGGA TAATGGCCGT CTAATTCAAC AAGGTGATTA CTCCACCCTT AGCCAGTCTG CTGGTTCATT TGCCAATCTG CTGTCTCAGC GCAATGAGGA GCTTTAA
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Protein sequence | MNKTRQYELI RWLKKQSAPA QRWLRLSMLL GLLSGLLIIA QAWLLATLLQ SLIIDELPRA TLTTEFSLLA GAFALRAVIS WLRERVGFIC GMRVRQQIRK VVLDRLEQLG PSWVKGKPAG SWATIILEQI EDMQEYYSRY LPQMYLAVFI PVLILIAVFP INWAAGLILF VTAPLIPIFM ILVGMGAADA NRRNFVALAR LSGNFLDRLR GLDTLRLFNR AKAETDQIRD SSEDFRSRTM EVLRMAFLSS AVLEFFAAIS IAVVAVYFGF SYLGELNFGS YGLGVTLFAG FLVLILAPEF FQPLRDLGTF YHAKAQAVGA AESLVTFLSS EGEAIGQGEK QLDGKEAIAL EANELEILAP NGTRLAGPLN FSLPAGKRVA IVGQSGAGKS SLLNLLLGFL PYRGSLKVNG IELRELEPQV WRSQLSWVGQ NPHLPEQTLA TNILLRQPDA SEHQLQQAVE RAYINEFLKD LPQGLNTEIG DHSARLSVGQ AQRIAVARAL LNPCRLLLLD EPTASLDAHS EQLVMKALEE ASRAQSTLLV THQLEDTLGY DQIWVMDNGR LIQQGDYSTL SQSAGSFANL LSQRNEEL
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