| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2670 |
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| Symbol | |
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| ID | 6088089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2939353 |
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| End bp | 2940639 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641597739 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_001721400 |
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| Protein GI | 170024895 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00945071 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGAAT CCCTGACCTT ACAACCCATT GCCCTGGTTA ATGGCACCGT TAATTTACCT
GGTTCGAAGA GTGTCTCTAA CCGCGCACTG CTTCTGGCCG CGTTGGCCGA AGGGACCACT
CAGTTGAATA ACGTGTTAGA CAGCGATGAC ATCCGCCACA TGCTCAATGC ATTACAGGCA
TTAGGGGTGA ACTTCCGCCT TTCTGCTGAT CGCACATGCT GTGAGGTTGA TGGTCTGGGG
GGGAAATTAG TGGCTGAACA GCCATTGTCG CTTTTCTTGG GCAATGCCGG CACCGCCATG
CGTCCTTTGG CCGCGGTGTT ATGTTTGGGT AATAGCGATA TCGTACTGAC GGGTGAGCCT
CGGATGAAGG AGCGGCCAAT TGGCCATTTG GTGGATGCGC TACGTCAGGG CGGTGCACAG
ATCGATTATC TGGAACAAGA AAATTACCCG CCATTACGTT TACGTGGTGG TTTCCGAGGG
GGGGAGTTAA CTGTTGATGG GCGTGTCTCT AGCCAGTTCC TGACTGCTTT ATTGATGACC
GCCCCGCTGG CGGAGCAAGA TACGACTATT CGGATTATGG GTGATCTGGT TTCCAAACCT
TATATCGATA TTACTCTGCA CTTGATGAAA GCATTTGGTA TTGACGTGGG GCATGAGAAC
TACCAAATTT TCCACATCAA AGGGGGCCAG ACCTACCGCT CACCAGGGAC TTATTTGGTT
GAGGGCGATG CCTCGTCGGC TTCCTACTTC TTAGCGGCTG CGGCTATTAA GGGGGGAACA
GTGCGTGTCA CTGGTATTGG CAAGAAAAGT GTACAGGGCG ACACTAAATT TGCCGATGTG
TTGGAAAAAA TGGGCGCGAA AGTGACGTGG GGGGATGATT ATATCGAGTG CAGTCGTGGT
GAATTACAGG GCATTGACAT GGATATGAAC CACATTCCTG ATGCTGCAAT GACCATTGCG
ACTACGGCAT TATTTGCCAC GGGCCCAACG ACGATCCGCA ATATCTACAA CTGGCGGGTA
AAAGAAACTG ACCGGCTGAC GGCGATGGCA ACCGAGTTGA GAAAAGTAGG TGCTGAAGTG
GAAGAGGGGG AAGATTACAT CCGCGTGGTT CCACCCGTGC AGCTAACTGC TGCAGATATT
GGTACCTACG ATGACCACCG TATGGCGATG TGTTTCTCGC TGGTCGCGTT ATCAGACACC
CCCGTGACGA TCCTTGACCC GAAATGTACC GCAAAAACCT TCCCTGATTA TTTTGAACAG
TTTGCGCGTC TGAGCCAACT GGCCTGA
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| Protein sequence | MLESLTLQPI ALVNGTVNLP GSKSVSNRAL LLAALAEGTT QLNNVLDSDD IRHMLNALQA
LGVNFRLSAD RTCCEVDGLG GKLVAEQPLS LFLGNAGTAM RPLAAVLCLG NSDIVLTGEP
RMKERPIGHL VDALRQGGAQ IDYLEQENYP PLRLRGGFRG GELTVDGRVS SQFLTALLMT
APLAEQDTTI RIMGDLVSKP YIDITLHLMK AFGIDVGHEN YQIFHIKGGQ TYRSPGTYLV
EGDASSASYF LAAAAIKGGT VRVTGIGKKS VQGDTKFADV LEKMGAKVTW GDDYIECSRG
ELQGIDMDMN HIPDAAMTIA TTALFATGPT TIRNIYNWRV KETDRLTAMA TELRKVGAEV
EEGEDYIRVV PPVQLTAADI GTYDDHRMAM CFSLVALSDT PVTILDPKCT AKTFPDYFEQ
FARLSQLA
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