Gene YPK_2654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2654 
Symbol 
ID6087969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2915322 
End bp2917178 
Gene Length1857 bp 
Protein Length618 aa 
Translation table11 
GC content50% 
IMG OID641597723 
Producthypothetical protein 
Protein accessionYP_001721384 
Protein GI170024879 
COG category[S] Function unknown 
COG ID[COG2989] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.334629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGATGA TAAAAAGAAA GTTACAACGC GCACTCGTTT TATACTGCGC TTTAGTTTGC 
AGCCTGATGA CCGTGTTTAC TGCATCAGCC GCTGCTCCCG TAATGCCCGT GGATTCATCT
TCAGCTTTGC CAGCACGTGG TGCAACCATG TCCGTGGCTC AAAGTCGTTC GCAATTATTG
GCCGCGCTTC CAAAAGATGT CGTGCCACTC TATGCTGCGG AATTAGCGTC ATTATATGCG
GCGAACCAAA TGCAGCCTAT GTGGCAAGAC CGGGTTGCTG TTCAACGTTT CCAGCAACAG
TTAGCGGAGG TTGGGCTTTC AGGCATTCAA CCGCAGTTTA TGCAATGGGT TAAATGGTTG
AGCGAGCCAG AAATCACCGG TATGGCGCGT GATATTATTC TATCGGATGC GATGCTGGGT
TATTTACACT TTATTTCCGG TGTCGGTGCT AATGGCAGTG TTTGGTTATA CAGTAATGTG
CCTTACAAAA TGGCCATGCC GCCTGCAGCA GTTTTAAACG CCTGGCAGAA AGCGGTCAAT
GAAGGCTCGA CAGCCTCTTA TCTGGCGTCG TTGGCTCCGC AGCATCCGCA ATACGATAAA
ATGCAACAGG CGTTGAAGTT GATGCTAGCA GACCGACGCC CGTGGCCACA GATGCCTACT
GGGCCAAGTT TACGGCCGGG GCAACTTAGC GACGATATCC CTGCATTGCG GGAAATCCTT
GACCGAACGG GTATGTTGCA CCCAACAACC CCCGTGAAAG CGCCAGAGGT GATCCCTGTG
GAGAACCCTA CGGTGGCCGT CGTTAATGAC GATCTCTCTG TTGATGAAGA AAAAAATCGG
ACTCAGACCA ACAGCTTGGT GGTCAGCCCA TCAGCCGTCT CTGTCCCTGA GAGCGATGAT
GCGGCACCCG CACCGATGCC TCCCGTGAGC GTGGTCACGT TAACTGACAA TATCTATACT
CCTGAGTTGG TAGAAGCCGT TAAACGCTTC CAGCAATGGC AGGGGCTCAC TGATGACGGT
GTTATCGGCC CCCGTACCCG CGAATGGTTG AATGTCTCGC CACAAACGCG GGCCACGTTA
TTGGCATTGA ATATCCAACG ATTACGTATT TTACCGGGGC ATGTTGATAA CGGCATTATG
GTTAATATCC CAAATTATTC TCTGAATTAT TATAAAGATG GGGCCGAAGT GCTTTCATCT
CGGGTGATTG TTGGCCGTCC AAGTCGTAAA ACGCCCCTGA TGAGTAGTGC GTTGAATAAT
GTGGTGGTGA ACCCGCCGTG GAACGTGCCG ACCTCATTGG TACGGCAGGA TATCGTGCCC
AAAGCACGTA ACGATGCCGG GTATTTTCAG CGTAATGGCT ATACCGTGTT GTCCGGATGG
AGTAATGATG CTGAAGTGAT CAATCCTTCA ATGATTGACT GGAGTATTAT CTCGCCGAAT
AACTTCCCTT ACCGTTTGCG TCAGGCACCA GGTGCTAATA ACTCGTTAGG GCGGTTCAAA
TTTAACATGC CAAGTTCTGA TGCTATCTAT TTACATGACA CGCCGAATCA TGGCCTGTTC
CAAAAGGACA TTCGCGCCCT GAGTTCAGGT TGTGTCCGTG TCAATAAAGC GTCTGATTTA
GCGAACATGC TGCTGCAAGA TGCTGGCTGG AATGATGCAC GGGTCTCTTC CAAGGTAAAA
CAAGGTGATA CCACCTACGT CAATATCCGC CAGCGCGTTC CGGTGCAATT GTATTATCTG
ACAGCATGGG TTGCGGAAGA CGGTAAACCG CAGTTTAGAA CAGATATTTA CAATTATGAT
AAAATGGTGC GATCTGGTGC ACAAATCTCA CAGCAGGCTG AGTTTTTATT GCAATAA
 
Protein sequence
MSMIKRKLQR ALVLYCALVC SLMTVFTASA AAPVMPVDSS SALPARGATM SVAQSRSQLL 
AALPKDVVPL YAAELASLYA ANQMQPMWQD RVAVQRFQQQ LAEVGLSGIQ PQFMQWVKWL
SEPEITGMAR DIILSDAMLG YLHFISGVGA NGSVWLYSNV PYKMAMPPAA VLNAWQKAVN
EGSTASYLAS LAPQHPQYDK MQQALKLMLA DRRPWPQMPT GPSLRPGQLS DDIPALREIL
DRTGMLHPTT PVKAPEVIPV ENPTVAVVND DLSVDEEKNR TQTNSLVVSP SAVSVPESDD
AAPAPMPPVS VVTLTDNIYT PELVEAVKRF QQWQGLTDDG VIGPRTREWL NVSPQTRATL
LALNIQRLRI LPGHVDNGIM VNIPNYSLNY YKDGAEVLSS RVIVGRPSRK TPLMSSALNN
VVVNPPWNVP TSLVRQDIVP KARNDAGYFQ RNGYTVLSGW SNDAEVINPS MIDWSIISPN
NFPYRLRQAP GANNSLGRFK FNMPSSDAIY LHDTPNHGLF QKDIRALSSG CVRVNKASDL
ANMLLQDAGW NDARVSSKVK QGDTTYVNIR QRVPVQLYYL TAWVAEDGKP QFRTDIYNYD
KMVRSGAQIS QQAEFLLQ