Gene YPK_2628 details

Gene Information

• Locus tag: YPK_2628
• ID: 6089124
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 2884019
• End bp: 2884654
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 641597697
• Product: regulator of competence-specific genes
• Protein accession: YP_001721358
• Protein GI: 170024853
• COG category: [K] Transcription
• COG ID: [COG3070] Regulator of competence-specific genes

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0000000928932
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCA TGTCAGAAAA AAGGATCGCT CAAGCACAAG TTCGTTTTGG TTTTCTGGGG 
CAGATAACAA TTCGTTCCCA ATTTGGGGGC TATGGTCTAT TGGTTAATAG CATCATGTTC 
GCTGTTGTTT CGGAAGGTGA GCTTTATTTG CGTGCTAACG ATAATATTGA GGATTTATTC 
CGCGCCAGTG GAATGGCTAA CCTTGTTTAT GCTAAACGCG GGTTACCTGT CTTGCTACGT 
TATTATCGGG TTGATACTTC ATTATGGAAT GATGGACTCA GATTACATCA TTTCGTCCGG 
CAGGCTTATG AGGGCGCGAA AATAGACGTT CTGAGTAAGA AAGGCCCAGT GGTACGGCTG 
AAGGATTTAC CTAATCTTAG CGCCAGCCTT GAACGGCTAT TATGGAAAGT GGGTATAAAG 
AATGCGACTG AATTACGCCT TGAAGGCGCT AAATGTTGCT ACTTGAAATT ACGGGCGTTA 
AGGCGCTCTC TTGGGATTAA TATTTTGCTG GCGTTGGCGG GGGCTATCAG TGGCTATCAT 
TATGCTGCTT TGCCTTTGAT GATGCGCAGT GAGCTTATCG AATGGTTTGA AAAACACATC 
CATCCAGCAA AGGCTCCATT ATATGAAACG GCATAA 

 

Protein sequence

MKIMSEKRIA QAQVRFGFLG QITIRSQFGG YGLLVNSIMF AVVSEGELYL RANDNIEDLF 
RASGMANLVY AKRGLPVLLR YYRVDTSLWN DGLRLHHFVR QAYEGAKIDV LSKKGPVVRL 
KDLPNLSASL ERLLWKVGIK NATELRLEGA KCCYLKLRAL RRSLGINILL ALAGAISGYH 
YAALPLMMRS ELIEWFEKHI HPAKAPLYET A