| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2587 |
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| Symbol | |
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| ID | 6089637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2842048 |
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| End bp | 2843811 |
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| Gene Length | 1764 bp |
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| Protein Length | 587 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641597655 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001721317 |
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| Protein GI | 170024812 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3519] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03359] type VI secretion protein, VC_A0110 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACGACT TAACCCTGCG TTATTTTGAC GCTGAAATGC GCTACCTGCG CGAAGCGGGC
GAAGAGTTTG CCCGCGCGCA CCCTGATCGG GCTGCCGGAT TAAATCTGGA TAAAGCCGGG
GCGCGTGACC CCTATGTGGA ACGCCTGTTT GAAGGCTTTG CCTTCCTGAT GGGCCGCATG
CGAGAAAAAC TGGATGATGA CCTGCCGGAG CTGACCGAAG GGTTGGTCAG CCTGCTGTGG
CCGCACTACC TGCGTACCAT TCCGTCGCTT TCTATTGTGG AGTTCACTCC ACAATGGCAG
GAGATGAAAG AGCGCATGGG GGTGAGTAAA GGTTTTGAAG TGCTATCCCG CCCCATTGGT
GAACGTGAAA CCCGTTGCCG CTATACCACC ACGCAAGAGA TGGACCTGCT CCCTCTGACC
CTGCGCCGTG CCGGGCTGGA CAGTGAACCC GATGGCCGGT CGGTTATCCG GCTGCGCTTT
GATTGCAGCG CGCTGGCCGA CTGGAGCCGT ATCAACCTGA GCCGCCTGCC GCTCTATTTT
GATGCCGATG CGCCGCTGGC CTGCGCCCTG CATGAGGCGC TGACCCTGAA TACCGCCAAA
CTCTGGATCC GGTTGCCGGG GCAGGCTGAT CGCCAGCCGC TGGACGGCCA TTTCGCGCCG
CTGGGGTTCG GGGAGCAGGA TACGCTGTGG CCGAAGGCCG ACAGTGCGTT CAGTGGTTAT
CAGCTCTTGC TGGAGTACTT TACCTTCCGC GAAAAGTTTA TGTTTGTCGC GTTGCAGGGG
CTGGATGGGA TCGAGCTGCC GGCGGAACTG CCGTGGTTTG AGATTGATGT GGTGCTGGAA
AAACGCTGGC AACATGATTT CTCGTTCTCC GAAAAGAACC TGCGCCTGCA TTGTGTGCCG
GTGATTAACC TGTTCCCGCT GGAATCGGAC CCACTGTCGC TCTCTTCATT ACAGACCGAA
TACCTGCTGC GCCCAATGCG CATTCAGGAC GGTTATACCG AAGTGTATTC GGTGGACTCG
GTGATCTCCT CCCGTCATAC CGGGCATCAG GTCTATGTCC CGTTCACCAG CTTTCGCCAC
AAGGGGGGGA TGTTGCGCCA TGATGCGCCG GAGTATTACT ACCATACGCG GGTCAAACGC
GGGCCTTCGG GGTTACACGA TACCTGGCTG GTGCTGGGGG GCGAGGCGTT TGATAACCAC
AGCGTACCGG ATAATGAAAA TTTGTCGCTG AGCCTGACCG GCACCAACGG GCAGTTACCG
CGTAAAGCGC TGCAAAGCAC GGTGCTGGAT ACGGCGGTGA AATCCACCGG GGCTCAGGTG
CGGGTACGTA ATCTCTCCGC GCCGTCATTG CCATGCTACC CGCCGAACCG CGACCGTTTT
CACTGGCGGG TGCTGAGCCA TCTGGGCAGC AGTTTTCTGT GGATGATGGA TAACGCCGAA
GTGCTGCGCG GCACGCTGGC GCTGTATGAC TGGACGGACA ACGAAATGAA CCGCCGTCGG
CTGGAGGCGA TCGCCGAGGT CAAACACAGC GAGATTGAAC GCTTTGAGCG GGGCTATTTG
CTGCGCGGGG TGCACATTGA AATCACCCTC GACAGCAACG GCTTTACCGG TACCGGGGAT
ATTTGTCTGT TTGGGGAAAT GCTCAGTCGC TTCTTTGCCC TGTATACCGA TATTCACCTG
TTTAATCGTC TGACTCTGAT ACTGCAACCG ACAGGAGAAC GTTTGGAATG GGAAGAGAAT
CATCAGTCCC GCCTTCCCGG CTAA
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| Protein sequence | MDDLTLRYFD AEMRYLREAG EEFARAHPDR AAGLNLDKAG ARDPYVERLF EGFAFLMGRM
REKLDDDLPE LTEGLVSLLW PHYLRTIPSL SIVEFTPQWQ EMKERMGVSK GFEVLSRPIG
ERETRCRYTT TQEMDLLPLT LRRAGLDSEP DGRSVIRLRF DCSALADWSR INLSRLPLYF
DADAPLACAL HEALTLNTAK LWIRLPGQAD RQPLDGHFAP LGFGEQDTLW PKADSAFSGY
QLLLEYFTFR EKFMFVALQG LDGIELPAEL PWFEIDVVLE KRWQHDFSFS EKNLRLHCVP
VINLFPLESD PLSLSSLQTE YLLRPMRIQD GYTEVYSVDS VISSRHTGHQ VYVPFTSFRH
KGGMLRHDAP EYYYHTRVKR GPSGLHDTWL VLGGEAFDNH SVPDNENLSL SLTGTNGQLP
RKALQSTVLD TAVKSTGAQV RVRNLSAPSL PCYPPNRDRF HWRVLSHLGS SFLWMMDNAE
VLRGTLALYD WTDNEMNRRR LEAIAEVKHS EIERFERGYL LRGVHIEITL DSNGFTGTGD
ICLFGEMLSR FFALYTDIHL FNRLTLILQP TGERLEWEEN HQSRLPG
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