| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2586 |
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| Symbol | |
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| ID | 6089353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2840999 |
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| End bp | 2842084 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641597654 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001721316 |
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| Protein GI | 170024811 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.385239 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGAAGAG AATCATCAGT CCCGCCTTCC CGGCTAATCA CCCGGCTTAA GCGCGATATC
GGCCAGATCA ATTTTTACCG TTTCTGTCAG TTGCTGGAGC AACAACCGGG AACCTTGCCG
CTCGGCAGTA CCAACAGCCC GGCGGATGAT CCGGTGCGTT TTCGTCCGCA TCCCGGCATG
GGTTTTCCGG TCAGTGAACT GAAGGCGCTG GAAAACGACC CGCTGCATCC GGAAGCCCCG
TTGACCGCGC GCACCACCTT TATGGGGTTG TACGGGGTGG ATTCGCCTTT GCCGACGGCC
TATATCGACG ATATCACCCA GCAGCGCGAA GGGCATGAGG CGCTGGAAGG GTTCCTCGAT
ATTTTCAACC ACCGTTTTAT GACGCAGTTT TATCGCATCT GGCGCAAATA TTCCTATCCG
GCCACTTTTG AGTCGGGCGG CACAGACAAT ACCTCTCAGA GCCTGTTGGG GCTGATAGGC
ATGGGTATTC CTGGCTCACA GCAGCATTTT GCCACCCCGA CATCGCGCTT TCTGGCCTTG
CTGGGGGTGA TGCGACAACC GGGGCGCACT GCCGAAGGGG TACAGGCGCT GGTCCGGCTG
CTGGCCCCGT TTACCGAGGC GGATGTCACG CCCCATTGCC TGCGCACGGT ACGCCTGACT
TCTCCGATGG CGTTTGCCGA TGAAGGGGCC AACTGGCTGG ACGGCTACAC CGTGCTGGGT
GATGAGGCCA TTGATGCCAA CAGTCAGTTG CTGATTTCGC TGCGCACGGC AGACCGCGAC
GAGGCCGCTA ACTGGTTACC GGATGGCCCG CTGTATACCG ATTTTCTGGT GCTGTTGCGG
GTCTATCTGG GCTGGCGTTA CCGGGCCTGT ATCCAACTGA CGGTCGCCAC CCGGTTGCTG
CCGGCGTTGG TGTTGGATGA GACACCGATA AGGCTGGGAT TAACCGGCGT GCTGGGGCTG
GATGACGCGA CGCGGTCAGA CGATATACCT GAATATTTTA CCGTGGCGCT GGGCCACTAC
CGTGGGCTGG CTCCACAGCA ACATCAAGAA GGAAACCGAC GTGTTAACTA CCGTTTGGAA
AAATAA
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| Protein sequence | MGRESSVPPS RLITRLKRDI GQINFYRFCQ LLEQQPGTLP LGSTNSPADD PVRFRPHPGM
GFPVSELKAL ENDPLHPEAP LTARTTFMGL YGVDSPLPTA YIDDITQQRE GHEALEGFLD
IFNHRFMTQF YRIWRKYSYP ATFESGGTDN TSQSLLGLIG MGIPGSQQHF ATPTSRFLAL
LGVMRQPGRT AEGVQALVRL LAPFTEADVT PHCLRTVRLT SPMAFADEGA NWLDGYTVLG
DEAIDANSQL LISLRTADRD EAANWLPDGP LYTDFLVLLR VYLGWRYRAC IQLTVATRLL
PALVLDETPI RLGLTGVLGL DDATRSDDIP EYFTVALGHY RGLAPQQHQE GNRRVNYRLE
K
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