Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2562 |
Symbol | |
ID | 6089237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2811624 |
End bp | 2813321 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641597630 |
Product | malate dehydrogenase |
Protein accession | YP_001721292 |
Protein GI | 170024787 |
COG category | [C] Energy production and conversion |
COG ID | [COG0281] Malic enzyme |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAACTTG AATACGAAAG TAAGCGCCCC CTGTACATCC CCTACGCTGG TCCAATATTG CTGGAGTTCC CACTTCTCAA TAAAGGCAGT GCTTTTACCA ATGATGAGCG TAATCATTTC AATCTACATG GCCTATTGCC AGAAGCGGTT GAAACCATTG AAGAGCAAGC AGAGCGGGCT TACCGCCAGT ATCAGGATTT TAAAAACGAC GACGATAAGC ATATTTATCT GCGCAATATT CAGGATACCA ATGAAACGCT GTTTTATCGT CTGCTAGAAG CTCACCTAAG TGAGATGATG CCAATTATCT ACACCCCAAC CGTTGGGGAA GCGTGTGAGC ACTTTTCTGA TATTTATCGC CGTGCACGCG GGTTATTTAT TTCCTATCCG AACCGCGAAC ACATTGATGA CATGCTACAA AATGCCACCA AACAAAATGT TAAGGTTATC GTCGTCACTG ATGGCGAGCG TATTCTGGGC CTTGGCGACC AAGGTATCGG CGGTATGGGT ATCCCAATAG GTAAATTATC GTTGTATACC GCATGCGGCG GCATTAGCCC AGCCTACACG TTGCCCGTAG TACTTGATGT CGGGACAAAT AACCCACAAC GGTTGAATGA CCCACTGTAT ATGGGCTGGC GTCATCCACG AATCTCCGGT GACGAGTACT ATGCATTTGT TGATGAATTT ATTCAGGCGG TAAAACGTCG TTGGCCAAAT GTCTTGTTGC AGTTTGAAGA TTTTGCACAG AAAAATGCCA CCCCGCTGCT AAACCGCTAT CGCGATGAAT TATGCTGTTT CAATGATGAT ATACAAGGGA CCGCGGCAGT CACTCTGGGT AGCCTGATTG CCGCCAGCCA TGCTGCGGGT AGCCAACTGC GCGACCAAAC AGTCACCTTC CTTGGTGCTG GTTCCGCGGG TTGTGGTATT GCCGAGCAGA TCATCGCTCA AATGATGTCA GAGGGCTTAA GCGAAATACA AGCTCGAGCG CGGATCTTTA TGGTCGACCG GTTTGGTCTG CTGACAGATA AACTGCCTAA CTTGCTCGAT TTCCAAAGTA AATTGGTACA AAAAAGTGAC GACCTACACC ACTGGAATCT GCACAATGAT GCGATTTCAT TACTTGATGT TGTCCGTAAT GCCAAACCAA CCGTACTCAT TGGGGTTTCA GGTCAACCAG GGCTGTTTAC TGAAGAGTTG ATCCGTGAAA TGCACAGCCA TTGCGCCCGG CCTATCGTCA TGCCATTGTC TAACCCAACA TCACGGGTTG AAGCCCGACC AGAAGATATT ATCAACTGGA CCGATGGCGC GGCACTGGTT GCCACAGGTA GCCCATTCCC ACCAGTCAGT TATAAAGAAA AACTGTATCC TATTGCTCAA TGTAATAACT CTTACATCTT CCCCGGTATC GGCTTGGGTG TATTGGCATC TGGTGCGAGC CGTGTCACGG ATGGCATGTT AATGGCTGCC AGCCGGGCAT TAGCAGAGAG CTCACCACTC GCACGTCATG GCGAAGGGGC CTTACTGCCT AATATCGATG ATATTCAGGC GGTATCGAAA GCTATCGCAA TGCGGGTCGG TCAAGCCGCT CAATTACAAG GTGTTGCTAT TGTGACTTCG GAAGAAGCGT TGTCTAAAGC CATTGAGCAC AATTATTGGC AACCACAGTA CCGTAGCTAT AAACGCACCT CGTTTTGA
|
Protein sequence | MELEYESKRP LYIPYAGPIL LEFPLLNKGS AFTNDERNHF NLHGLLPEAV ETIEEQAERA YRQYQDFKND DDKHIYLRNI QDTNETLFYR LLEAHLSEMM PIIYTPTVGE ACEHFSDIYR RARGLFISYP NREHIDDMLQ NATKQNVKVI VVTDGERILG LGDQGIGGMG IPIGKLSLYT ACGGISPAYT LPVVLDVGTN NPQRLNDPLY MGWRHPRISG DEYYAFVDEF IQAVKRRWPN VLLQFEDFAQ KNATPLLNRY RDELCCFNDD IQGTAAVTLG SLIAASHAAG SQLRDQTVTF LGAGSAGCGI AEQIIAQMMS EGLSEIQARA RIFMVDRFGL LTDKLPNLLD FQSKLVQKSD DLHHWNLHND AISLLDVVRN AKPTVLIGVS GQPGLFTEEL IREMHSHCAR PIVMPLSNPT SRVEARPEDI INWTDGAALV ATGSPFPPVS YKEKLYPIAQ CNNSYIFPGI GLGVLASGAS RVTDGMLMAA SRALAESSPL ARHGEGALLP NIDDIQAVSK AIAMRVGQAA QLQGVAIVTS EEALSKAIEH NYWQPQYRSY KRTSF
|
| |