Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2547 |
Symbol | |
ID | 6089332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2791691 |
End bp | 2793238 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641597615 |
Product | pyridoxal-dependent decarboxylase |
Protein accession | YP_001721277 |
Protein GI | 170024772 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAG ATATCTATGA GGAAAACCAT TTTATAGATC AAGGTAATGA TATAACTGAT GTGCTTTGTT TAGGAAACTT CTTAAATAAA GATAGCGCTG AACACTATTA TGAGAGCGTG AATAATATCA CTGCAAGGAT TAAGGCTATA TTCACCCTAG TAGATAAACC TTTTAGCGGG ATATTACCCT CTGAACTATC ACCTGATTTT TATTGTATTG ATTTAAATCA GCCACTAACG TCATTGGATA GCGCATTAGA TGAATTACAG CAGCTATATA TTAAGGATGC TATATACTTT CATCACCCTA AATATGTTGC GCATCTTAAT TGCCCGGTTG TTCTCCCTGC AGTTCTGGCA GAAAGCATTA TTAGTACCCT TAATTCTTCG TTGGATACCT GGGATCAAAG TGCCGGTGCG ACCTTAATTG AGCAGAAAGT TCTGGATTGG ACCCGCGATA AAATGGCCCT AGGTAGCCAG GGCGACGGTA TTTTCACCAG CGGTGGAACA CAGTCAAATC TTATGGCGAT ACTGCTGGCC CGTGATCATT TTTGCCACCA ACGTGATGCT AACCACCAGA ATAAATTGCA GGGATTACCC GCTGATTCTC ATAAATTTCG TATCTTTACT TCGGTGGTTA GCCATTTCAG TACACAAAAA GCCGCAGCAC TATTGGGCCT TGGCTATAAC GCGGTTGTTG CCGTGCCCTA TGACAGTGAA TTCAAGATGG ATGCGCAGGC ATTGGATCAA AGCATTGCGC TCTGTTTATC ACAAGGCAAT ATTCCCTTAG CCATTGTTGC TACCACCGGA ACGACTGACT TTGGCAGTAT TGACCCCTTG CACACTATTT CGACGTTGGC CAAACAGTAC GGTCTTTGGT TACATGTGGA TGCTGCCTAC GGCTGTGGCC TATTAGTTTC CTCACACTAT GAACAGCTAC TTTCCGGTAT TGAAATGGCT GATTCTGTGA CGGTGGATTA TCACAAGTCC TTTTTTCAAC CGGTAAGTTG CAGTGCTTTT TTTGTTAAAG ATAAACAGCA TTTTTCTTAT CTGACTTATC ACGTGGAATA CCTCAATCCA TTAAGTGCAT CACTGGAAGG TACGCCGAAT TTAGTGAACA AAAGTATTCA GACCACCCGT CGCTTTGATG CGCTAAAGCT GTGGTTAACG CTACGGATTA TGGGAGCCAA ACAGCTTGGT TTGGCTTTTG AACATGTTAT GGATACGGCA CAGCAGGCTT ATCAACTTAT GTTGCCTAAT CCGTATTTTG AACTAATACA TCGCCCGGTA TTAAGCACGC TGGTATTTCG TTTTATGCCG GAACAGCCTC GCAGCGATGA CGATATTGAT CGAACCAATG CCTATATTCG CAAAGCGTTA TTCCGTGAGG GGCATACGGT TATTGCAGGT ACCAAAGTAA ATGGTAAACA GTATTTGAAA TTTACCTTCC TTAATCCGAC GACCACACTC CAGCACCTGA ACGAAATTGT GGATGCCATT ATTACCGAGG GTAAAAACTA TCCGACTCTC TATAACAGTC AATCATGA
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Protein sequence | MYKDIYEENH FIDQGNDITD VLCLGNFLNK DSAEHYYESV NNITARIKAI FTLVDKPFSG ILPSELSPDF YCIDLNQPLT SLDSALDELQ QLYIKDAIYF HHPKYVAHLN CPVVLPAVLA ESIISTLNSS LDTWDQSAGA TLIEQKVLDW TRDKMALGSQ GDGIFTSGGT QSNLMAILLA RDHFCHQRDA NHQNKLQGLP ADSHKFRIFT SVVSHFSTQK AAALLGLGYN AVVAVPYDSE FKMDAQALDQ SIALCLSQGN IPLAIVATTG TTDFGSIDPL HTISTLAKQY GLWLHVDAAY GCGLLVSSHY EQLLSGIEMA DSVTVDYHKS FFQPVSCSAF FVKDKQHFSY LTYHVEYLNP LSASLEGTPN LVNKSIQTTR RFDALKLWLT LRIMGAKQLG LAFEHVMDTA QQAYQLMLPN PYFELIHRPV LSTLVFRFMP EQPRSDDDID RTNAYIRKAL FREGHTVIAG TKVNGKQYLK FTFLNPTTTL QHLNEIVDAI ITEGKNYPTL YNSQS
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