Gene YPK_2447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2447 
SymbolpurT 
ID6089387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2679254 
End bp2680435 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content53% 
IMG OID641597513 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_001721177 
Protein GI170024672 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAACCA TTGGAACCGC TCTGCGCCCC GGCGCTACCC GTGTCATGTT GCTGGGCGCA 
GGCGAGCTGG GTAAAGAAGT GGCGATTGAA TGCCAAAGAT TAGGACTTGA GGTGATTGCG
GTTGATCGCT ATGCCGATGC CCCCGCGATG CATGTTGCTC ATCGTAGCCA CGTCATTAAT
ATGCTGGATG GTGCCGCACT CAAGCAGTTA GTCGCCCAGG AAAAACCGCA TTATATCGTG
CCGGAAATCG AAGCTATCGC CACCGATATG CTGGTTGAGC TGGAGAAGAT GGGCCAACAT
GTTGTGCCTT GTGCAGAAGC CACCCGTCTG ACCATGAACC GCGAGGGCAT CCGCCGTCTG
GCCGCAGAGA CGTTGCAATT ACCCACGTCC AGTTACCGCT TTGCCGACAC AGATAGCGCC
TTCTTTCAGG CCGTGCGCGA CATAGGTTAC CCTTGCATTG TTAAACCGGT AATGAGTTCT
TCTGGTAAAG GCCAGAGCCT GATCCGCAGC GAGGAACACC TTCAGGCTGC TTGGGAATAT
GCACAACAAG GTGGCCGTGC CGGTAGCGGG CGCGTGATTA TCGAAGGTTT GGTTCATTTT
GATTTTGAAA TCACTTTACT GACGATCCGT GCTGTCGATG GTATTCATTT TTGCGCCCCA
ATAGGCCACC GTCAGGAAGA TGGCGACTAT CGCGAGTCCT GGCAACCCCA AGCCATGAGT
GATATCGCCC TGCAGCGAGC AAAAGAGATC TCCGCACAAG TGGTCACCGC GTTAGGTGGG
TTTGGGCTAT TTGGCGTAGA ACTGTTTGTT TGTGGTGATG ACGTTATTTT CAGCGAAGTT
TCTCCTCGCC CACACGATAC CGGCATGGTG ACCTTGATTT CGCAGAATAT GTCCGAGTTT
GCCTTGCACG TGCGCGCATT TCTTGGTTTG CCGATTGGCA CTATCCGCCA ATATGGGGCG
GCTGCCTCGG CGGTTATTTT GCCAGAACTG ACCAGCCAGA ATATCACCTA TCGTGGGCTG
GAAACTGCCC TGATAGGCGA TACACAGATT CGGTTATTTG GTAAACCTGA AATTGCCGGT
AAGCGGCGTT TAGGGGTTGC ACTGGCCGTT GCAGATAATA TAGAAACCGC CATTGAAGTG
GCAAAAAAGG CCGCGGGAAA CATTGAGGTC AGTGGGGAAT GA
 
Protein sequence
MLTIGTALRP GATRVMLLGA GELGKEVAIE CQRLGLEVIA VDRYADAPAM HVAHRSHVIN 
MLDGAALKQL VAQEKPHYIV PEIEAIATDM LVELEKMGQH VVPCAEATRL TMNREGIRRL
AAETLQLPTS SYRFADTDSA FFQAVRDIGY PCIVKPVMSS SGKGQSLIRS EEHLQAAWEY
AQQGGRAGSG RVIIEGLVHF DFEITLLTIR AVDGIHFCAP IGHRQEDGDY RESWQPQAMS
DIALQRAKEI SAQVVTALGG FGLFGVELFV CGDDVIFSEV SPRPHDTGMV TLISQNMSEF
ALHVRAFLGL PIGTIRQYGA AASAVILPEL TSQNITYRGL ETALIGDTQI RLFGKPEIAG
KRRLGVALAV ADNIETAIEV AKKAAGNIEV SGE