Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2423 |
Symbol | flgD |
ID | 6087234 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2656294 |
End bp | 2656980 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641597489 |
Product | flagellar basal body rod modification protein |
Protein accession | YP_001721153 |
Protein GI | 170024648 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.563147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATTA CCAATTCCCT GACGGAAAGT GATTACGGTA TTACCGGCAC GACCGGGACC AGTTCCACTA CCGGCAGCAG TAGTCAAGAT CTGCAAAACA GCTTCCTGAC GTTATTAGTG GCGCAGTTGA AAAACCAAGA CCCTACTAAC CCAATGGAAA ACAACGAGTT GACCACACAG TTGGCGCAAA TCAACACCGT GAGTGGCATT GAAAAGCTGA ATACGACCCT CGGTGCTATT ACCGGTCAAA TTGACAGCAG CCAATCTCTG TACGCCACCA GCCTGATTGG TCGAGGCGTT ATGGTCCCTG GTACCAATAT ATTTACGGGC AGCACCGATG GCACGGTCAG CACCACGCCT TTTGGCCTCG AATTGCAACG ACCTGCGGAT AAAGTGACCG CCACCATTAG CGATAGCAAT GGTCAGGTGG TACGGACCAT TGAGATCGGT GGTTTAAACG CAGGTGTTCA CTCCTTTACC TGGGATGGCT CACTGGACGC GGGCGGTAAT GCGCCAGATG GTGCTTATAC CGTAGCCATT ACTGCCAGCA ATGGTGGGGA ATCACTGGTC GCAACGCCGT TGAACTACGC CATTGTCAAC GGTGTAACCC GCGGCGCGGA TGGCTCCAAA CTGGACTTGG GTCTGGCAGG AACCATCACG CTGGATGAAG TGCGCCAGAT TTTATAA
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Protein sequence | MAITNSLTES DYGITGTTGT SSTTGSSSQD LQNSFLTLLV AQLKNQDPTN PMENNELTTQ LAQINTVSGI EKLNTTLGAI TGQIDSSQSL YATSLIGRGV MVPGTNIFTG STDGTVSTTP FGLELQRPAD KVTATISDSN GQVVRTIEIG GLNAGVHSFT WDGSLDAGGN APDGAYTVAI TASNGGESLV ATPLNYAIVN GVTRGADGSK LDLGLAGTIT LDEVRQIL
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