Gene YPK_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2423 
SymbolflgD 
ID6087234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2656294 
End bp2656980 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content53% 
IMG OID641597489 
Productflagellar basal body rod modification protein 
Protein accessionYP_001721153 
Protein GI170024648 
COG category[N] Cell motility 
COG ID[COG1843] Flagellar hook capping protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.563147 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTA CCAATTCCCT GACGGAAAGT GATTACGGTA TTACCGGCAC GACCGGGACC 
AGTTCCACTA CCGGCAGCAG TAGTCAAGAT CTGCAAAACA GCTTCCTGAC GTTATTAGTG
GCGCAGTTGA AAAACCAAGA CCCTACTAAC CCAATGGAAA ACAACGAGTT GACCACACAG
TTGGCGCAAA TCAACACCGT GAGTGGCATT GAAAAGCTGA ATACGACCCT CGGTGCTATT
ACCGGTCAAA TTGACAGCAG CCAATCTCTG TACGCCACCA GCCTGATTGG TCGAGGCGTT
ATGGTCCCTG GTACCAATAT ATTTACGGGC AGCACCGATG GCACGGTCAG CACCACGCCT
TTTGGCCTCG AATTGCAACG ACCTGCGGAT AAAGTGACCG CCACCATTAG CGATAGCAAT
GGTCAGGTGG TACGGACCAT TGAGATCGGT GGTTTAAACG CAGGTGTTCA CTCCTTTACC
TGGGATGGCT CACTGGACGC GGGCGGTAAT GCGCCAGATG GTGCTTATAC CGTAGCCATT
ACTGCCAGCA ATGGTGGGGA ATCACTGGTC GCAACGCCGT TGAACTACGC CATTGTCAAC
GGTGTAACCC GCGGCGCGGA TGGCTCCAAA CTGGACTTGG GTCTGGCAGG AACCATCACG
CTGGATGAAG TGCGCCAGAT TTTATAA
 
Protein sequence
MAITNSLTES DYGITGTTGT SSTTGSSSQD LQNSFLTLLV AQLKNQDPTN PMENNELTTQ 
LAQINTVSGI EKLNTTLGAI TGQIDSSQSL YATSLIGRGV MVPGTNIFTG STDGTVSTTP
FGLELQRPAD KVTATISDSN GQVVRTIEIG GLNAGVHSFT WDGSLDAGGN APDGAYTVAI
TASNGGESLV ATPLNYAIVN GVTRGADGSK LDLGLAGTIT LDEVRQIL