Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2414 |
Symbol | |
ID | 6087414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2646208 |
End bp | 2647209 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641597480 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001721144 |
Protein GI | 170024639 |
COG category | [K] Transcription |
COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.415693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAAAA ACCACGCCAA TAATATGAAG AACCGGGTGA CTGAATCCTC TAAGGGCACG GCCTTGCACC TCAACCCGAT GGTTTCTGCC GCCTGGCTCT ACTACGAAGA TCAACTGAAA CAAAGTGATA TTGCGGAGAT ATTGGGAGTT TCTCGCGCGA CAGTGATCAA CTATTTGAAT GAGGCGCGTT TACGCGGAAT AGTGGAAATC AAAATTTCCG ATGAGCATTT GGCGTCGATG CGTTTAGCAC AAGCCATTAT GAGAGAGTTC GGGTTAGAAC GTTGTATTGT TATCCCCGAT GATCAAGGGC AGCGCCCTAC CGCATTACGT GTCGGTGAAG CGGGCGCGCA ATTACTGTCT TCACTTATCG CACCAAATGA CGTTTTAGGG GTTTCGTGGG GGCAAACAGT ATTGGCGCTC TCTCACGCGA TCACCCGGCA TCCGGTGGCT GATTTAACGG TCATTCAGAT AACCGGGAGC ATGCATTCGA CCTATGAGTT CTCCCCTGAA CTTTGCACTT CAAATATTGC TGACCGCTAC CGCGCCCGGT GTATTAATTT ACATGCGCCC TTTCTGCTTT CACGACCAGA AATCAAAGAG ATGCTGTGTA ATGAACCTGC ATTAATGCCG CAGTTGGCGT TACTCAACAC CTGTACCAAA ATTGTTTTCG GCGTGGGTAA TACCGCAGCA GATAGCACTA TTTTCAGCTC CAATACCGTG ACGTACGCTG CGGTAGAACC CTACCGGCAA CAAGGGGCGG TGGCTATTAT TGCCGGGCGT TATATTGATG CCACTGGCGC ACCTATTTAT GACCATCTTG ATGACAGAAT GATTGGATTG ACGATTGATG AGATTGATCA GATCCCAGTG CGGATCTGCG TGGCTGGCGG TTTGAATAAA GTCGAGGCTA TCCGGGCGAC CCTCAAGGGC CAACACGCCA CCGTGTTAGT CACTGATGAG GTGACGGCAT GTGCGTTAAT GACCCGTGCG AAGACCCCGT AG
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Protein sequence | MEKNHANNMK NRVTESSKGT ALHLNPMVSA AWLYYEDQLK QSDIAEILGV SRATVINYLN EARLRGIVEI KISDEHLASM RLAQAIMREF GLERCIVIPD DQGQRPTALR VGEAGAQLLS SLIAPNDVLG VSWGQTVLAL SHAITRHPVA DLTVIQITGS MHSTYEFSPE LCTSNIADRY RARCINLHAP FLLSRPEIKE MLCNEPALMP QLALLNTCTK IVFGVGNTAA DSTIFSSNTV TYAAVEPYRQ QGAVAIIAGR YIDATGAPIY DHLDDRMIGL TIDEIDQIPV RICVAGGLNK VEAIRATLKG QHATVLVTDE VTACALMTRA KTP
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