Gene YPK_2401 details

Gene Information

• Locus tag: YPK_2401
• ID: 6087163
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2634346
• End bp: 2634882
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 641597467
• Product: flagellar biosynthesis protein FliO
• Protein accession: YP_001721131
• Protein GI: 170024626
• COG category: [N] Cell motility
• COG ID: [COG3190] Flagellar biogenesis protein
• TIGRFAM ID: [TIGR03500] flagellar biosynthetic protein FliO

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTGCAG CTGCACCGAC CTCGACAACA TTGGCCTCAA CAACGTTGGC CTCGACAACA 
ACACAGCAAA CCGCAACCAC AGGGTTTGCT GCCAGTCATC CGGGGTCGAA CAGTCAGTTA 
CAGCCGAGCA GTCAACTGCA ACCGCAATCA AGCGCCGCCC CCCCGGCCAT GCCTGCAGGG 
GGGGTGTTAA CGCAGGTGGG CAGTGCGCTG GGCGGTATTC TGTTATTGAT TCTGTTTGTG 
GCCTGGCTGG TGCGGCGGTT GGGGTTTGCC CCACAGGCCC GTAATAGCAA GCTACTGAAC 
GTGCGGGCCA GTTGTCAGGT TGGGCAACGT GAGCGGGTGG TGATTGTCGA AGTCGATGAC 
ACCTGGCTGG TATTGGGCGT TACGGCCCAA CAGGTTACCC CCTTGCATAC ACTGGCGCGT 
CCGGTGGTTG AGGCACCGCG ACAGGCGGAT GGCATACGAT CAACAAGCAA TGCGCAAGCG 
GCTGATTTTC GCCAACTGCT GAACAAAATA TTGAAACATC CGGAAAAATC GGCATGA 

 

Protein sequence

MTAAAPTSTT LASTTLASTT TQQTATTGFA ASHPGSNSQL QPSSQLQPQS SAAPPAMPAG 
GVLTQVGSAL GGILLLILFV AWLVRRLGFA PQARNSKLLN VRASCQVGQR ERVVIVEVDD 
TWLVLGVTAQ QVTPLHTLAR PVVEAPRQAD GIRSTSNAQA ADFRQLLNKI LKHPEKSA