Gene YPK_2400 details

Gene Information

• Locus tag: YPK_2400
• Symbol: fliN
• ID: 6087534
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 2633930
• End bp: 2634346
• Gene Length: 417 bp
• Protein Length: 138 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 641597466
• Product: flagellar motor switch protein FliN
• Protein accession: YP_001721130
• Protein GI: 170024625
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1886] Flagellar motor switch/type III secretory pathway protein
• TIGRFAM ID: [TIGR02480] flagellar motor switch protein FliN

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGACC CTAAGTTTCC GTCTGCTGAT GGAAAGGAAT CCGTGGACGA TCTGTGGGCT 
GATGCGTTTA ATGAGCAGCA AGCAACAGAA AAACCCACGG CCACAACCGA AGGCGTCTTT 
AAATCGCTGG AAGCACCTGA GGGGCTGGGT AATTTGCAGG ATATCGATTT AATTCTGGAT 
ATTCCGGTAA AACTCTCCGT TGAATTAGGT CGCACCAAAA TGACCATCAA AGAGTTACTG 
CGCCTGTCAC AAGGCTCGGT GGTCTCCCTT GATGGTTTGG CAGGCGAACC CCTGGATATT 
TTGATTAACG GTTATCTGAT TGCTCAGGGC GAAGTGGTGG TAGTGGCCGA TAAATACGGG 
GTCCGCATCA CGGACATCAT TACGCCATCT GAACGTATGC GCCGTTTGAG CCGCTAA 

 

Protein sequence

MSDPKFPSAD GKESVDDLWA DAFNEQQATE KPTATTEGVF KSLEAPEGLG NLQDIDLILD 
IPVKLSVELG RTKMTIKELL RLSQGSVVSL DGLAGEPLDI LINGYLIAQG EVVVVADKYG 
VRITDIITPS ERMRRLSR