| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2382 |
|---|
| Symbol | fliD |
|---|
| ID | 6087577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2616100 |
|---|
| End bp | 2617500 |
|---|
| Gene Length | 1401 bp |
|---|
| Protein Length | 466 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641597448 |
|---|
| Product | flagellar capping protein |
|---|
| Protein accession | YP_001721112 |
|---|
| Protein GI | 170024607 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1345] Flagellar capping protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGTA TCAGTGCACT AGGTACCGGT TCAGGACTGG ATTTAAATAC ATTGCTGTCA
CAATTATCGG CCGCAGAGCA GACACGCCTT ACCCCGCTAA CCACGCAGCA AACCAGTTAT
AAAAGCAAAC TTACCGCTTA TGGTGTTTTG CAAAGTGCGT TGGCAAAGCT TGAAACCGCG
TCTACCGCCC TGAAAAAAGC TGACACGTTG AATTCTACGG CAGTCAGCGG CAGCAATTCC
GCATTCAGCG CGACAACGGA TAGTGCGGCC AGTGCAGGTA CGTACAGTAT TGAAGTCACC
AATCTGGCCA AAGCACAATC GCTGTTATCG ACAGATGTGC CTAGCGCTAC AGATAAATTG
GGTAGCAGTG ATGCAACACG CACAATCACG ATTGCTCAAC CCGGCCAAAA AGAGCCGATG
AAAATCAGCC TGACCAGCGA GCAAACTTCG CTGACGGGTA TCCGTGATGC TATTAATAAG
CAGGAAGGCA GTGTCAACGC CAGTATTATG AAAGCAGATG ATAATACTTA TTATCTGGCA
TTAACGTCGA AGGATACCGG TACGCAATCA GAAATGACCA TCAGTGTAGC GGGTGATGAA
ACCTTAAATA ATTTCCTGAA CTATACCCCC AGCAGCACCG GCGGTAGTGG TGCGCTGACG
CAAAAAGTCA AAGCGGAAGA CGCCACCTTG AGTGTTAATG GTGTCAGTAT TACCCGCCAA
AGTAATACCA TTACCGATGC ACCTCAGGGC GTCACCATCA ATCTGAAAGC CGTCACCAAA
GAGGGCGCGC CAGAGCAACT GACTATTGTC CGTGACAACA CAGCCACAAA GGCGGCGATC
CAAAGTTTTG TCGATGCCTA TAACTCATTA CAAACCACCT TCGGCTCACT GACCAAATAT
ACCGTGGTAG AGACAGGCCA AGATCAATCC ACGAGTAATG GTGCATTAGT TGGGGATGGC
ACATTGCGCT CTATCCAGAC GCAATTAAAG AGCCAATTGG CCTCTAGTCA ATCTGGGGAT
TTGAAAACCT TAGCCAGCAT CGGGATCACG CAAGATCTCG ACGGTAAGTT GGTTATCGAC
GCCGATAAAT TAAATACTGC ACTCACCGAT AAACCCAATA GCGTCACTGC ATTTTTTGTG
GGTGATGGGG AAACTACTGG TTTTGCTACT CAGACTGAAA AGTTGCTCAA TACCGCATTG
GATACGACAT TAGGGACATT AAAAACAGCC ACTGACGGTA TTAATACTTC ACTAAAAAAC
CTGGATAAAC AAATTGCGGC AACGACTGCC AGTATAGAAA CAGCCATTGA GCGCTATAAA
ACACAATTTA CTCAATTGGA TAAGCTGATG ACATCAATGA ACAGTACAGC CAGTTTCTTA
ACACAACAAT TTGAATCATA A
|
|---|
| Protein sequence | MASISALGTG SGLDLNTLLS QLSAAEQTRL TPLTTQQTSY KSKLTAYGVL QSALAKLETA
STALKKADTL NSTAVSGSNS AFSATTDSAA SAGTYSIEVT NLAKAQSLLS TDVPSATDKL
GSSDATRTIT IAQPGQKEPM KISLTSEQTS LTGIRDAINK QEGSVNASIM KADDNTYYLA
LTSKDTGTQS EMTISVAGDE TLNNFLNYTP SSTGGSGALT QKVKAEDATL SVNGVSITRQ
SNTITDAPQG VTINLKAVTK EGAPEQLTIV RDNTATKAAI QSFVDAYNSL QTTFGSLTKY
TVVETGQDQS TSNGALVGDG TLRSIQTQLK SQLASSQSGD LKTLASIGIT QDLDGKLVID
ADKLNTALTD KPNSVTAFFV GDGETTGFAT QTEKLLNTAL DTTLGTLKTA TDGINTSLKN
LDKQIAATTA SIETAIERYK TQFTQLDKLM TSMNSTASFL TQQFES
|
|---|
| |