Gene YPK_2355 details

Gene Information

• Locus tag: YPK_2355
• Symbol: uvrC
• ID: 6088833
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: -
• Start bp: 2588123
• End bp: 2589976
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641597420
• Product: excinuclease ABC subunit C
• Protein accession: YP_001721085
• Protein GI: 170024580
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0322] Nuclease subunit of the excinuclease complex
• TIGRFAM ID: [TIGR00194] excinuclease ABC, C subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.0361706
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGGAGAC GTTATCAAAT AGTGACTGAT CTTTTTGATT ATAAAGAATT TTTGAAAACT 
GTTACTAGTC AGCCTGGTGT TTATCGGATG TACGATACTG CAGGAACAGT TATTTATGTC 
GGTAAAGCAA AAGATCTCAA AAAGCGTCTG ACGAGCTATT TTCGTGCTCA GGTCGCCAAC 
CGAAAAACTG AAACGTTAGT TAAAAATATT GCTCAAATTG ATGTCACCGT TACGCATACT 
GAAACGGAAG CATTGTTGCT TGAGCACAAT TACATCAAGC TTTATCAGCC ACGTTACAAT 
GTGTTGCTAC GTGATGATAA GTCATATCCG CTTATTTTCT TGAGTGCGGA TGAGCACCCG 
CGCCTTGCTG TACACCGTGG CGCAAAACAT GAGAAAGGGG AGTATTTTGG GCCGTTTCCA 
AACTCCTATG CAGTGCGTGA AACGTTGGCA TTATTACAGA AGCTTTTTCC AGTAAGGCAA 
TGTGAGAATA GTGTTTACCG CAATCGCTCA CGGCCTTGCC TACAATATCA GATTGGGCGT 
TGTTCCGGGC CTTGTGTGGA GGGGTTGGTA AGTGAAGAGG AGTATCAGCG CCAAGTTGAT 
TACGTTCGCT TGTTCCTCTC AGGTAAAGAT CAGCAAGTCT TGACGCAGCT AATCACCCGT 
ATGGAGGAGG CTAGCCAGCA ACTGCATTTT GAAGATGCAG CACGGATTCG CGATCAAATC 
CAAGCTGTGC GTCGAGTAAC GGAACAACAG TTTGTTTCTG GCGACAGTGA AGATCTTGAT 
GTTATCGGTG TGGCATTTGA TGCGGGGCTC GCTTGTGTCC ATGTACTGTT TATCAGATTA 
GGGAAAGTAT TAGGTAGCCG GAGTTATTTC CCTAAAGTTC CCGCGGGTAC TGAGTTGAGC 
GAAGTCGTTC AGACTTTTGT TGGGCAGTTT TATTTGCAAG GAAGCCAAGG GCGTACATTG 
CCTGGTGAAA TTTTACTGGA TTTTACCCTC ACAGAAAAAG ACCTGTTGGC ATCTTCTCTT 
TCTGAACTGG CTGGGCGAAA AATTCAGATA CAAAGCCGCC CCCGAGGAGA TCGTGCGCGT 
TATCTCAAGT TAGCACGTAC CAATGCTTCA ACCGCATTGA TAACCCGCTT ATCTCAGCAA 
TCGACTATTC ATCAACGCAT GAAGGAATTA GCCAAGGTCC TTAAGCTTGA TGAAATTAAT 
CGTATGGAAT GTTTTGATAT CAGCCATACG ATGGGGGAAC AGACCGTAGC CTCTTGTGTC 
GTATTTGATG CGAATGGTCC TGTACGATCT GAATATCGGC GCTACAATAT TAGTGGTATC 
ACGCCGGGTG ATGATTATGC AGCGATGGCT CAAGTACTAA AACGTCGATA TGGGAAAGCA 
TTAGACGATC AAAAAATTCC TGATGTCATA TTTATTGACG GTGGGAAGGG GCAGTTGTCA 
CAGGCCTTTG ATGTTTTTGC CTCGTTGAAT GTTCCGTGGG ATAAGCAAAA GCCATTGCTA 
GTCGGTGTAG CGAAAGGTAG TGATCGCAAA GCGGGTTTAG AAACATTATT CTTGGCATCA 
GAAGGTGAGG GCTTTTCTTT ACCCCCAGAT TCACCAGCAT TACATCTGAT CCAGCATATT 
CGTGATGATT CTCATAATCA TGCGATAACC GGGCACCGGC AGCGGCGATC TAAAGTAAAA 
AATACCAGTG CGTTAGAAAT GATAGAAGGT GTTGGCCCCA AACGACGGCA AGTTTTGTTG 
AAATATATGG GTGGACTACA ACCTTTGTTT AACGCAAGCG TCGAGGAAAT TGCAAAAGTG 
CCGGGTATTT CACAAGCATT GGCAGAAAAA ATCCACAATG CATTGAAACA CTGA 

 

Protein sequence

MRRRYQIVTD LFDYKEFLKT VTSQPGVYRM YDTAGTVIYV GKAKDLKKRL TSYFRAQVAN 
RKTETLVKNI AQIDVTVTHT ETEALLLEHN YIKLYQPRYN VLLRDDKSYP LIFLSADEHP 
RLAVHRGAKH EKGEYFGPFP NSYAVRETLA LLQKLFPVRQ CENSVYRNRS RPCLQYQIGR 
CSGPCVEGLV SEEEYQRQVD YVRLFLSGKD QQVLTQLITR MEEASQQLHF EDAARIRDQI 
QAVRRVTEQQ FVSGDSEDLD VIGVAFDAGL ACVHVLFIRL GKVLGSRSYF PKVPAGTELS 
EVVQTFVGQF YLQGSQGRTL PGEILLDFTL TEKDLLASSL SELAGRKIQI QSRPRGDRAR 
YLKLARTNAS TALITRLSQQ STIHQRMKEL AKVLKLDEIN RMECFDISHT MGEQTVASCV 
VFDANGPVRS EYRRYNISGI TPGDDYAAMA QVLKRRYGKA LDDQKIPDVI FIDGGKGQLS 
QAFDVFASLN VPWDKQKPLL VGVAKGSDRK AGLETLFLAS EGEGFSLPPD SPALHLIQHI 
RDDSHNHAIT GHRQRRSKVK NTSALEMIEG VGPKRRQVLL KYMGGLQPLF NASVEEIAKV 
PGISQALAEK IHNALKH