Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2310 |
Symbol | |
ID | 6088698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2555352 |
End bp | 2555744 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641597372 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001721040 |
Protein GI | 170024535 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000103087 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAT ATATAGGCAT GCGTTTGCGG GAAGAACGGG AAAGGCTGGG ATTGAGTCAG GTCGCTATGG GTGATATCGG CGGAGTTAAA AAACTAACCC AATTGAAGTA TGAAAAAGGA GATAGCTGCC CTGACGCGCT CTATTTGGCA TCACTGCATA AATTTGGTCT AGATGTGCAA TACGTAGTGA TTGGCGTGCG TTCTGTGACT GCACTGACAA ACGATGAAGA AGAACTGGTT AATCATTACC GATCTGCGCC TTTAGCGGTT AAGCAGGCCG TGTTTGCTGC ACTAAGCGTG AGTAATACCT CTGAACCAGG AACAACAGTT AAGGTTACAG GTGGTACCGG TCAGCGGATC GCTGGTAGAG ATTTTCACGA GAACAAAAAG TAA
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Protein sequence | MEKYIGMRLR EERERLGLSQ VAMGDIGGVK KLTQLKYEKG DSCPDALYLA SLHKFGLDVQ YVVIGVRSVT ALTNDEEELV NHYRSAPLAV KQAVFAALSV SNTSEPGTTV KVTGGTGQRI AGRDFHENKK
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