Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2291 |
Symbol | |
ID | 6087886 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2540460 |
End bp | 2540798 |
Gene Length | 339 bp |
Protein Length | 112 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641597353 |
Product | transposase |
Protein accession | YP_001721021 |
Protein GI | 170024516 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3328] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0059921 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGCTGG ATAAGTTTGC GGAGGCCTGG GACGACAAAT ACCCAAAAAT TAGCAAAATT TGGCGTACGC ACTGGGAAAA TCTCAATACA TTCTTCGGCT ATCCGCCCGA TATCCGCAAG GCCATCTACA CCACGAATGC CATTGAGTCA CTGAACAGTG TGATCCGGCA GGCGATAAAG AAACGCAAAG TATTCCCAAC GGACGACTCG GTGCGGAAGG TTATTTATCT GGCTATCCGG GATGTTTCGA AAAAATGGAG TATGCCAATA CAGAACTGGC GGTTGGCAAT GAGTTGTTTT ATTATCGAGT TTGGTGACCG CCTGAGCGAT CACCTTTAA
|
Protein sequence | MALDKFAEAW DDKYPKISKI WRTHWENLNT FFGYPPDIRK AIYTTNAIES LNSVIRQAIK KRKVFPTDDS VRKVIYLAIR DVSKKWSMPI QNWRLAMSCF IIEFGDRLSD HL
|
| |