Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2269 |
Symbol | |
ID | 6087784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2519600 |
End bp | 2520232 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641597332 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001721001 |
Protein GI | 170024496 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAAAT CAGTGATGAT AGTTGATGAC CACCCAGCTA TTCGTGTCGC TATCCATGCA TTGCTATCAC AAAGCAAAGA GTTTTCGACG ATCAGTGAAT CCGTTGATGG CAGTGAAGCA TTGGAAAAAC TAAAAAATAA TCCCGTTGAT CTGGTTATTA TCGATATTGA GCTTCCTAAT TTTGATGGTT TCTCGTTGCT AAAAAAATTG CAGCAACGTG GTTTTACCGG CAAATCACTG TTCCTGTCAG CCAAGAATGA GCAAGTTTTT GCAGTGCGGG CATTACAAGC TGGCGCTAAT GGATTTATCA GTAAGAATAA AGATATTAGT GAAATACTTT TTGCGGCGCA AAACGTATTA CGTGGTTACT CTTTCTTCCC ATCAGAAACG TTGACCCAAT TAGCTGGGCA ACCTTCCAGC CATGATCCTG TCAATAGGGC GCGGTTGTTG TCAGAGCGGG AAATTAACGT TTTGCGTTAT CTGGTAAATG GTCTGTCAAA TAAACAGATT GCCGATGAAA TGTTTATCAG CAATAAAACT GTGAGTACCT ATAAAACCCG AATTTTGACC AAATTGGGAC TCAGTTCTGT CATTGAATTA GCCGATTATG CACACACCCA TAATTTGGTG TAA
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Protein sequence | MTKSVMIVDD HPAIRVAIHA LLSQSKEFST ISESVDGSEA LEKLKNNPVD LVIIDIELPN FDGFSLLKKL QQRGFTGKSL FLSAKNEQVF AVRALQAGAN GFISKNKDIS EILFAAQNVL RGYSFFPSET LTQLAGQPSS HDPVNRARLL SEREINVLRY LVNGLSNKQI ADEMFISNKT VSTYKTRILT KLGLSSVIEL ADYAHTHNLV
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