Gene YPK_2193 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2193 
Symbol 
ID6088500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2430680 
End bp2432065 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content52% 
IMG OID641597260 
Productheavy metal sensor signal transduction histidine kinase 
Protein accessionYP_001720929 
Protein GI170024424 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR01386] heavy metal sensor kinase 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAGC GTTCTATCTC TGGGCGGCTG GCGCTAATGT TTGCCTTGGC CTCCATACTG 
ATAGTTTCGG CTCTCGGTAT TGTACTGCGA AGCTCCTTGC ATAATTCATT GCAAAAGCAG
ATGCATAACG AATTGCAATT CAGGGAGTCG CTGATGGCAC CGTGGATCCT CTCCCGTACC
ACGCTGGACG GCTGGCAAAC GTTGGCGACC AAATTCACCG ATTTGGCCGC TGCTGAGGGC
GGCCGCGTAC AATACTGGGT CCTCAGTGAT GACCCCCAGC TTCAGGTAGG CGGCCCGGCA
CCCCGTGGTG TAACCTGGGC TTCGTTAAGC AAAGGATTCA GCAAAGTACC CGGTGCGACA
GACGAGTCAT GCTCCCTATT TCTACTGATG TCGGAAATTC CTGCCCAAGG TGAGCGCCCC
GCTCTGCGCT ATGTGGTCGC TATCGATTCC ACGCCGTATA TGGGTACTCT GAATGAATTT
ACCCGCACGC TGATCGTCAT TACTGCGATT GGCGTCTTAT TCGTGGCACT GCTGGGGTTC
GTGATTGCCA GAATAGGTAT GCGCCCTGTT AATAAACTCA GCGAACAGGC CCAGCACCTT
GCGCCAGGAA ATCACGGGCA GCGTCTGGAT ACCTTAACTC TGCCGGATGA ACTGCAAAAA
CTGGCCGTCG CATTCAACGG CGTGCTCGAA CGGCAGGAAA TCGCCTGGCG GCAACTTGAA
AGTTTTAATG CTGATGTCGC ACATGAACTG AGAACCCCGT TGACCAATCT GATGGGGCAA
ACGCAATTAG GTCTATCTCG TAAACGGGAA ACGCATGAGC TCGAAGATTT ACTGGAGTCC
AATCTGGAAG AACTCGAGAG AATGACCTCT ATTGTTAACG ATATGCTGTT CCTCTCCCAT
GCTCAAGCTG GGGAGCACGC AACCCAGTTA ACCGACGTGT CTCTTCGGGA AGAGACCTAT
AAGACCACGG AGTATGTAGA ACCTTCATTT GCCGAAAAAA ATTTGTCTAT TCATGTTGAG
GGAGATATCA CTGCACGCAT TGATCGGCGG CTTTTCCACC GCTCACTGGC GAATCTGCTA
GAAAACAGCG CCCGCCATGC TGTTACTGGT ACTACCGTGA AAGTGACGAT CTCCAGAGAA
AATAATCTGG CATCCATCGC GGTAGCCAAC ATTGGAGCTC CCATTGCGGC GGAACATCTA
AACCGTTTGT TTGAGCGTTT TTATCGTGTT GATTCTTCCC GTGCACGCAG TGACACACAC
CATGGACTCG GGCTCTCCAT CGTCAGGGCG GTGGCGATAA TGCATCGTGG AGATGTGTTT
GCCAGTAGCC AGAATGGGAT TAATACCTTT GGTCTGACCC TTGCAATAAC TGACCCTTAT
ATATAG
 
Protein sequence
MIKRSISGRL ALMFALASIL IVSALGIVLR SSLHNSLQKQ MHNELQFRES LMAPWILSRT 
TLDGWQTLAT KFTDLAAAEG GRVQYWVLSD DPQLQVGGPA PRGVTWASLS KGFSKVPGAT
DESCSLFLLM SEIPAQGERP ALRYVVAIDS TPYMGTLNEF TRTLIVITAI GVLFVALLGF
VIARIGMRPV NKLSEQAQHL APGNHGQRLD TLTLPDELQK LAVAFNGVLE RQEIAWRQLE
SFNADVAHEL RTPLTNLMGQ TQLGLSRKRE THELEDLLES NLEELERMTS IVNDMLFLSH
AQAGEHATQL TDVSLREETY KTTEYVEPSF AEKNLSIHVE GDITARIDRR LFHRSLANLL
ENSARHAVTG TTVKVTISRE NNLASIAVAN IGAPIAAEHL NRLFERFYRV DSSRARSDTH
HGLGLSIVRA VAIMHRGDVF ASSQNGINTF GLTLAITDPY I