Gene YPK_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2180 
SymbolhemA 
ID6087799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2418834 
End bp2420150 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content50% 
IMG OID641597247 
Productglutamyl-tRNA reductase 
Protein accessionYP_001720916 
Protein GI170024411 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0373] Glutamyl-tRNA reductase 
TIGRFAM ID[TIGR01035] glutamyl-tRNA reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00403267 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTCA GACGAGAATC CATACTAACA CCAGTATTAC TCGAAGCCGT TCCCATGACT 
CTGCTTGCAT TAGGCATTAA TCACAAAACC GCACCTGTAT CGTTACGTGA ACGAGTGACG
TTTTCACCGG AATCGATGGA TCAGGCGCTG AATAGCTTGC TCCAACAGCC GTTGGTACAG
GGCGGTGTCG TGTTGTCCAC GTGCAACCGG ACTGAACTGT ATCTCAGTGT GGAACAGCAA
GAAAACCTAC ACGAACAATT AACCGCCTGG CTGTGTAACT ATCATAAACT CAGCCCGGAT
GACGTGAGAC AAAGCCTGTA CTGGCATCAT GGTAATGACG CTGTCCGCCA TTTGATGCGG
GTCGCCAGTG GTTTGGATTC CCAAGTTTTG GGTGAACCAC AAATATTAGG CCAGGTGAAA
AAAGCGTTTG CTGAATCTCA GCGCGGGCAA TCTCTGTCGA GTGAACTGGA ACGGTTATTC
CAGAAATCTT TTTCTGTCGC CAAACGTGTA CGCACAGAAA CTGAAATTGG TGCCAGTGCG
GTTTCGGTCG CTTTTGCTGC CTGTTCTCTG GCTCGGCAAA TTTTCGAATC ATTATCAGAA
CTGCATTTAT TATTGGTCGG GGCCGGTGAG ACGATTGAAT TGGTGGCGCG CCACCTGCGT
GAACATCAGG TCAAACATAT GATTATTGCC AACCGCACCC GTGAACGTGC GCAATCTCTG
GCAAGCGAGG TCGGTGCCGA AGTGATAACG TTGCCAGAAA TTGATGCTCG TCTGGCGGAT
GCTGATATTA TTATCAGTTC TACCGCCAGC CCGTTACCTA TTATTGGTAA GGGAATGGTC
GAGCGGGCAT TGAAAACCCG TCGTAATCAG CCAATGTTAT TTATTGATAT TGCCGTACCC
CGTGATATCG AACCGGAGGT CGGTAAGTTG TCGAACGCCT ATTTATACAG TGTTGATGAT
TTGCAGGCGA TCATTCAGCA CAACATGGCT CAGCGGCAGG CTGCGGCTGT TCAGGCTGAA
TCGATAGTAC AACAGGAAAG CATGAACTTT ATGACCTGGC TGCGGGCTCA GGGAGCGGTA
GAAACGATCC GTGACTATCG CTCTCAAGCT GAGCAGGTCC GCAGTGAAAT GACCGCTAAA
GCCTTGGTAG CCATTGAGCA GGGCGCTAAC GTGGAACAGG TCATTAATGA GTTGGCCTAT
AAGCTGACCA ACCGCCTTAT TCATGCGCCT ACCAAATCCC TCCAGCAAGC CGCCAGCGAT
GGCGATATGG AGCGGTTGCA ATTATTACGC GACAGCCTTG GGCTGGATCA GCATTAG
 
Protein sequence
MRFRRESILT PVLLEAVPMT LLALGINHKT APVSLRERVT FSPESMDQAL NSLLQQPLVQ 
GGVVLSTCNR TELYLSVEQQ ENLHEQLTAW LCNYHKLSPD DVRQSLYWHH GNDAVRHLMR
VASGLDSQVL GEPQILGQVK KAFAESQRGQ SLSSELERLF QKSFSVAKRV RTETEIGASA
VSVAFAACSL ARQIFESLSE LHLLLVGAGE TIELVARHLR EHQVKHMIIA NRTRERAQSL
ASEVGAEVIT LPEIDARLAD ADIIISSTAS PLPIIGKGMV ERALKTRRNQ PMLFIDIAVP
RDIEPEVGKL SNAYLYSVDD LQAIIQHNMA QRQAAAVQAE SIVQQESMNF MTWLRAQGAV
ETIRDYRSQA EQVRSEMTAK ALVAIEQGAN VEQVINELAY KLTNRLIHAP TKSLQQAASD
GDMERLQLLR DSLGLDQH