Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2179 |
Symbol | prfA |
ID | 6087898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2417719 |
End bp | 2418801 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641597246 |
Product | peptide chain release factor 1 |
Protein accession | YP_001720915 |
Protein GI | 170024410 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0216] Protein chain release factor A |
TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0912707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTCTT CTATTGTTGC CAAACTGGAA GCGTTACAAG AGCGCCATGA AGAAGTTCTG GCATATCTTG GCGATGCCAG CGTTATTGCC GATCAAGACC GTTTCCGCGC GCTATCACGT GAATATGCGC AATTGACGGA TGTCACTCGC TGTTTTAAAG AGTGGCGCAG CGCTCAGGAT GATATCGAAG CCGCAGAAAT GATGCTGGAC GATCTCGAAA TGCGTGAAAT GGCACAGGAA GAATTAAAAA TTGCCAAAGC GCGGAGCGAA GAGCTCGAGC AGCAGCTACA AGTGTTGTTG TTGCCAAAAG ATCCTGATGA TGAACGTGAC TGCTTCCTGG AAATCCGCGC GGGGACTGGC GGCGATGAAG CCGCTATTTT TGCCGGTGAT ATGTTCCGTA TGTACAGCCG TTATGCCGAA ACCCGCCGCT GGAAAGTTGA AATCATGAGC GCCAGCGAGG GTGAGCATGG CGGTTATAAA GAAATTATTG CCAAAATATC TGGCGATGGC GTCTTCGGCC AGTTGAAGTT TGAATCCGGT GGTCACCGGG TTCAGCGTGT ACCCGAAACC GAGTCTCAAG GCCGCATCCA CACTTCCGCC TGTACCGTTG CTGTGATGCC CGCCATCCCA GAGGCTGAAC TGCCAGAAAT CAACGCCGGT GACTTGCGTA TAGATACGTT CCGCTCGTCA GGTGCGGGTG GTCAGCATGT TAACACCACC GATTCAGCCA TCCGTATTAC ACATATTCCT ACCGGTATCG TGGTGGAGTG TCAGGACGAG CGTTCGCAGC ACAAAAACAA AGCGAAGGCA ATGTCAGTGT TAGGCGCGCG TATTCGTGCT GCTGAAATGC AAAAACGGCA ATTGGCAGAG GCATCAGAGC GCCGTAACTT GTTAGGGACC GGTGATCGTT CTGACCGTAA CCGTACTTAC AACTTCCCGC AGGGGCGCGT TACTGACCAT CGTATCAACC TGACGCTGTA TCGGCTTGAT GAAGTGATGG AAGGTAAACT GGATATGCTC ATCCAGCCCA TTGTGCAGGA ATATCAAGCT GACCAACTGT CTGCATTGTC AGAGCAAGAC TAA
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Protein sequence | MKSSIVAKLE ALQERHEEVL AYLGDASVIA DQDRFRALSR EYAQLTDVTR CFKEWRSAQD DIEAAEMMLD DLEMREMAQE ELKIAKARSE ELEQQLQVLL LPKDPDDERD CFLEIRAGTG GDEAAIFAGD MFRMYSRYAE TRRWKVEIMS ASEGEHGGYK EIIAKISGDG VFGQLKFESG GHRVQRVPET ESQGRIHTSA CTVAVMPAIP EAELPEINAG DLRIDTFRSS GAGGQHVNTT DSAIRITHIP TGIVVECQDE RSQHKNKAKA MSVLGARIRA AEMQKRQLAE ASERRNLLGT GDRSDRNRTY NFPQGRVTDH RINLTLYRLD EVMEGKLDML IQPIVQEYQA DQLSALSEQD
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