| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2122 |
|---|
| Symbol | |
|---|
| ID | 6088941 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2352676 |
|---|
| End bp | 2353488 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 641597190 |
|---|
| Product | cell division inhibitor MinD |
|---|
| Protein accession | YP_001720861 |
|---|
| Protein GI | 170024356 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG2894] Septum formation inhibitor-activating ATPase |
|---|
| TIGRFAM ID | [TIGR01968] septum site-determining protein MinD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00365598 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA TTATTGTTGT TACATCGGGT AAAGGGGGCG TTGGCAAGAC CACATCAAGC
GCGGCTATTG CTACCGGCTT GGCCCAGAAA GGTAAAAAAA CCGTGGTTAT CGATTTCGAT
ATCGGCCTGC GGAACCTTGA TTTGATTATG GGATGTGAGC GCCGGGTCGT TTATGATTTT
GTTAATGTTA TTCAAGGTGA TGCCACTTTG AATCAGGCAT TAATCAAAGA TAAACGTACC
GATAATCTGT ATATCCTGCC CGCATCTCAG ACCCGAGATA AAGACGCCCT GACCAAAGAG
GGTGTTGAGA AAGTGTTAAA CGATCTTGGT GAAATGAATT TTGAGTTTGT GGTGTGTGAC
TCTCCCGCGG GTATTGAAAG TGGCGCTCTG ATGGCACTGT ATTTTGCTGA TGAAGCGGTT
ATCACCACAA ACCCTGAGGT CTCCTCTGTT CGTGACTCAG ACCGTATTCT TGGCATATTG
TCATCAAAAT CTCGCCGGGC CGAAAATAGC CAAGAACCAA TTAAAGAACA TCTGCTGTTG
ACCCGTTATA ATCCTGGGCG CGTTAATCGC GGCGATATGC TTAGCATGGA AGATGTTTTG
GATATTTTGA GGATCCCTCT GGTCGGTGTG ATACCAGAAG ATCAATCGGT ATTACGCGCC
TCTAACCAAG GTGAGCCTGT GATTCTGGAC AAAGAGTCAG ATGCCGGTAA AGCTTATGAA
GATACCGTTG ACCGCTTGCT AGGAGAAGAA CGCCCCTTCC GCTTCGTAGA AGAAGAGAAG
AAGGGCTTCC TGAAACGCCT TTTTGGGGGA TAA
|
|---|
| Protein sequence | MARIIVVTSG KGGVGKTTSS AAIATGLAQK GKKTVVIDFD IGLRNLDLIM GCERRVVYDF
VNVIQGDATL NQALIKDKRT DNLYILPASQ TRDKDALTKE GVEKVLNDLG EMNFEFVVCD
SPAGIESGAL MALYFADEAV ITTNPEVSSV RDSDRILGIL SSKSRRAENS QEPIKEHLLL
TRYNPGRVNR GDMLSMEDVL DILRIPLVGV IPEDQSVLRA SNQGEPVILD KESDAGKAYE
DTVDRLLGEE RPFRFVEEEK KGFLKRLFGG
|
|---|
| |