Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2108 |
Symbol | |
ID | 6088393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2338316 |
End bp | 2339851 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641597176 |
Product | SpoVR family protein |
Protein accession | YP_001720847 |
Protein GI | 170024342 |
COG category | [S] Function unknown |
COG ID | [COG2719] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.342881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAACTT CAACATCGAA ACAGACCACA CAAGATAAGC GCCTGACTGA CGGCCCTGAC TGGACATTTG AGCTACTGCA AGTGTATCTG GACCAAATAG ATCGGGTGGC GAAACATTAC CGGCTTGATA CTTATCCCCA TCAGATAGAA GTGATTACCT CAGAACAAAT GATGGATGCC TATTCAAGTA TTGGCATGCC CATTAACTAT ACCCATTGGT CTTTCGGTAA AAAATTTATC GAAACTGAAC AAAAATATAA GTACGGTCAA CAGGGATTAG CCTACGAGAT TGTTATTAAC TCGAATCCTT GTATCGCCTA CTTAATGGAA GAGAACACCA TCACGATGCA AGCACTGGTT ATGGCCCATG CCTGCTACGG ACATAACTCC TTCTTTAAGA ATAACTATTT ATTCCGCGCG TGGACTGACG CCAGCTCCAT CGTGGACTAC CTACTCTTTG CCCGCCACTA TATTAATGAG TGTGAAGAGC GCTATGGCGT TGAAGAGGTT GAACGGTTGC TCGATTCTTG TCATGCGTTA ATGAATTATG GCGTTGATCG CTATAAGCGT CCGCAAAAAA TTTCGCTGGT CGAGGAGACC GCACGCCAAA AAAGCCGTGA AGAATATCTA CAAAGCCAAG TGAATTCCCT GTGGAAAACG TTGCCACGTA AAGATCGAGA AGAAGCTCCT GTTCAGGCAC AGCGCTACCC CAACGAACCG CAAGAAAATA TCCTCTACTT TATGGAGAAA AATGCACCGT TGTTGGAATC ATGGCAACGT GAAATATTGC GAATTGTCCG CAAAGTCAGC CAGTATTTTT ATCCCCAAAA ACAAACGCAA GTGATGAATG AAGGCTGGGC GACATTCTGG CACTACACCA TTCTTAACCA TTTATACGAT GAAGGCCGGG TCACCGACCG CTTTATGATG GAGTTTCTGC ACAGCCATAC CAACGTCGTG TATCAGCCAC CGTATAACAG CCCTTATTAC AACGGCATTA ACCCTTATGC TCTTGGCTTC GCTATGTTTC AGGATATTAA ACGGATCTGT CAGTCCCCGA CCGAGGAAGA CTATTATTGG TTCCCAGATA TTGCCGGGAA AGATTGGTTA GATACCCTAC ATTTTGCTAT GCGTGATTTT AAAGATGAAA GTTTCATCAG CCAGTTCTTA TCGCCAAAAA TAATGCGCGA TTTCCGCCTG TTTACCGTGT TGGACGACGA CAAGAATAAC TACCTGGAGA TTTCGGCTAT TCATAATGAA GAAGGTTATC GTACTATCCG CAATCAATTG TCCGCACAGT ATAACTTGAG CAACCATGAG CCAAACATTC AGGTATGGAA TGTTGATCTA CGTGGAGACC GCTCTCTGAC ACTGCGTTAT ATCCCGCATG ACCGAGCGCC ATTAGATAAA AGCCGCCAGC AAGTGATGAA GCATATTCAT CGGCTGTGGG GGTTTGATGT TCATATGGAA CAATTGAATG ATGATGGCAG TATCGATTTG CTCGACAGCA TTCCGCAGAA AACCAGTAAG ATTTAA
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Protein sequence | MTTSTSKQTT QDKRLTDGPD WTFELLQVYL DQIDRVAKHY RLDTYPHQIE VITSEQMMDA YSSIGMPINY THWSFGKKFI ETEQKYKYGQ QGLAYEIVIN SNPCIAYLME ENTITMQALV MAHACYGHNS FFKNNYLFRA WTDASSIVDY LLFARHYINE CEERYGVEEV ERLLDSCHAL MNYGVDRYKR PQKISLVEET ARQKSREEYL QSQVNSLWKT LPRKDREEAP VQAQRYPNEP QENILYFMEK NAPLLESWQR EILRIVRKVS QYFYPQKQTQ VMNEGWATFW HYTILNHLYD EGRVTDRFMM EFLHSHTNVV YQPPYNSPYY NGINPYALGF AMFQDIKRIC QSPTEEDYYW FPDIAGKDWL DTLHFAMRDF KDESFISQFL SPKIMRDFRL FTVLDDDKNN YLEISAIHNE EGYRTIRNQL SAQYNLSNHE PNIQVWNVDL RGDRSLTLRY IPHDRAPLDK SRQQVMKHIH RLWGFDVHME QLNDDGSIDL LDSIPQKTSK I
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