| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2070 |
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| Symbol | |
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| ID | 6088923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2296993 |
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| End bp | 2298630 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641597137 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001720810 |
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| Protein GI | 170024305 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.174491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCAACA TCACAAAGAA GAATCTCATT ACAGCTGCTG TAGCCGTTGC AATGAGCATG
ATGGCTGCGG GAAATACGTT TGCTGCCAAT GTTCCCACAG GCGTACAACT GGCTGAGAAG
CAAGTGTTAG TTCGTAATAA TGGCTCCGAG CCTCAATCGT TGGATCCACA TAAAATTGAA
GGGGTACCTG AATCCAATAT TTCACGTGAT CTACTTGAAG GGCTGGTGAT TAATGACCCT
AATGGCAATA TTGTACCGGG AGCCGCAGAG AGTTGGGATA ATAAAGACTT TAAAGTCTGG
ACGTTTAATA TTCGTAAAGA TGCCAAATGG TCAAATGGTG ACCCTGTAAC GGCACAGGAT
TTTGTTTACA GTTGGCAACG TCTGGCTGAT CCTAAAACAG TCTCTCCTTA TGCAAGCTAT
TTGCAATACG CTCATCTCAC TAATATCGAT GACATTATTA CCGGTAAAGC CGCGCCTGAC
ACGTTGGGTG TAAAAGCGTT GGATGATCAT ACGCTGGAAG TGACATTGTC TGAGCCTGTT
CCTTATTTGG ATAAGCTGTT AGCTCACCCG TCAATGTCAC CGGTGAATAA AACCGTGGTC
GAGAAATTTG GTGAAAAATG GACCCAACCA CAAAATTTTG TGGGGAATGG TGCTTATAAA
CTAAAAGATT GGATTGTTAA CGAACGTATC GTATTAGAAC GCAGTCCTAC GTATTGGGAT
AATGCGAAAA CAGTCATCAA TCAGGTGACT TATTTGCCAA TTTCTTCTGA AGTGACGGAT
GTTAACCGCT ATCGCAGCGG CGAAATTGAT ATGACGTATA ACAACATGCC AATTGAATTA
TTCCAAAAAC TGAAAAAAGA AATTCCAGAT CAAGTCCATG TTGATCCCTA TCTGTGTACT
TATTACTACG AAATTAACAA TCAAAAAGCC CCTTTTACGG ATGCTCGTGT ACGTGAAGCG
CTGAAATTGG GTATGGACCG CGATATCATC GTCAATAAAG TTAAAAATCA GGGAGATTTA
CCCGCTTATG GTTTCACCCC ACCCTATACC AGTGGCGCGG AGCTGACGCC GCCAGAGTGG
TTTAGCTGGA CACAAGAAAA ACGTAATGAA GTAGCGAAAA AACTATTGGC TGAAGCCGGG
TACACTAAAG ACAATCCACT GAAGTTTAGC TTGTTATATA ACACCTCCGA TTTACATAAA
AAATTAGCCA TTGCTGCCGC CTCTATTTGG AAGAAAAATC TGGGTGTAGA CGTTAAACTG
GAAAACCAAG AGTGGAAAAC GTTCTTGGAT ACCCGTCACC AGGGGACTTA TGATGTTGCC
CGTGCCGCTT GGTGTGCCGA TTACAATGAG CCATCCTCCT TCCTAAATAT GATGTTATCT
AACAGTAGCA ACAACACCAC CCATTATAAA AGTTCGGTAT TTGACAAGCT GATAGAAGAC
ACGTTGAAAG TGAAATCGGA AAAAGAGCGT GCTGACTTGT ATCAACAAGC GGAAATCCAG
TTGGATAAAG ATTCTGCCAT TGTGCCCGTG TTCTATTACG TGAGTGCGCG TTTAGTGAAA
CCTTATGTTG GTGGCTACAC GGGTAAGGAT CCACTGGACA ATATGCACGT TAAAGATCTT
TATATTATCA AGCAGTAA
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| Protein sequence | MTNITKKNLI TAAVAVAMSM MAAGNTFAAN VPTGVQLAEK QVLVRNNGSE PQSLDPHKIE
GVPESNISRD LLEGLVINDP NGNIVPGAAE SWDNKDFKVW TFNIRKDAKW SNGDPVTAQD
FVYSWQRLAD PKTVSPYASY LQYAHLTNID DIITGKAAPD TLGVKALDDH TLEVTLSEPV
PYLDKLLAHP SMSPVNKTVV EKFGEKWTQP QNFVGNGAYK LKDWIVNERI VLERSPTYWD
NAKTVINQVT YLPISSEVTD VNRYRSGEID MTYNNMPIEL FQKLKKEIPD QVHVDPYLCT
YYYEINNQKA PFTDARVREA LKLGMDRDII VNKVKNQGDL PAYGFTPPYT SGAELTPPEW
FSWTQEKRNE VAKKLLAEAG YTKDNPLKFS LLYNTSDLHK KLAIAAASIW KKNLGVDVKL
ENQEWKTFLD TRHQGTYDVA RAAWCADYNE PSSFLNMMLS NSSNNTTHYK SSVFDKLIED
TLKVKSEKER ADLYQQAEIQ LDKDSAIVPV FYYVSARLVK PYVGGYTGKD PLDNMHVKDL
YIIKQ
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