| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2061 |
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| Symbol | |
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| ID | 6088836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2288433 |
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| End bp | 2288972 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641597128 |
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| Product | virulence-related outer membrane protein |
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| Protein accession | YP_001720801 |
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| Protein GI | 170024296 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3637] Opacity protein and related surface antigens |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.906515 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATGGA TTACGACATT AGCGCCTCTT TCACTCGCAT TATCTTTGGG TATATCGGTG
GCGAATGCTG CCAGTGATGC TAGCAACACG GTATCTTTCG GTTACGCTCA GAGTACGCTA
AAAATTGATG GGGAGAAAAT TGGAAAAGAT AATAAAGGTT TTAATCTAAA GTATCGCCAT
GAGTTGGATT CAGTACTTGG CATTGTCGCC TCTTTTACCC ATACCAAGCA AAACTACGGT
ATGCCTGGAG ATAGCGATGG GAAGAGAAAG GTTGAGTATT ATTCTTTGAT GGTGGGTCCT
AGTTGGCGCT TTAATGAATT CGTCAGTGCC TACGCATTAA TAGGTGCAAC TCAAGGTAAG
AGTACACACA CTAAGCCGCG TATGGTAAGC AACACTGTTA GCAAAACAAG CATGGGGTAT
GGTGCTGGCT TGCAGTTCAA TCCGGTAAAA CACGTTGCTA TTGATACAGC TTATGAATAC
GCCAAAATAG AGGATGTAAA AATAGGAACT TGGATTGTGG GGGTTGGTTA CCGCTTCTAA
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| Protein sequence | MKWITTLAPL SLALSLGISV ANAASDASNT VSFGYAQSTL KIDGEKIGKD NKGFNLKYRH
ELDSVLGIVA SFTHTKQNYG MPGDSDGKRK VEYYSLMVGP SWRFNEFVSA YALIGATQGK
STHTKPRMVS NTVSKTSMGY GAGLQFNPVK HVAIDTAYEY AKIEDVKIGT WIVGVGYRF
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