| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2039 |
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| Symbol | |
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| ID | 6087452 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2269988 |
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| End bp | 2271022 |
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| Gene Length | 1035 bp |
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| Protein Length | 344 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641597106 |
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| Product | 23S rRNA pseudouridylate synthase B |
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| Protein accession | YP_001720779 |
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| Protein GI | 170024274 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA AGTCAGAAAA GCAAAAGTTA CCAACCCCAA ATCCACACAC CCCTGCTAAG
CCACAGGGCG CTAAAATTGT GGGTGAAAAA TTACAGAAAA TCCTGGCGCG CGCTGGCCAT
GGTTCTCGTC GTGAAATTGA AGCCATTATC CAGCAAGGCC GCGTCAGTGT TGACGGTAAA
GTGTCAAAGC TAGGTGATCG TGTAGAAGTG ACCCAGTCCA CTAAAATTCG TCTGGATGGT
CATCTTCTTT CAATTAAAGA ATCTGAAGAA AATGTGTGCC GCGTTCTGGC GTATTACAAG
CCAGAAGGTG AGCTTTGTAC GCGTAATGAT CCGGAAGGTC GTCCAACGGT ATTTGACCGT
TTACCTAAAC TGCGTGGTTC ACGTTGGGTT GCGGTTGGTC GTTTGGATGT GAACACCTCT
GGTTTATTAC TGTTCACTAC CGATGGCGAA TTGGCTAACC GCCTGATGCA CCCAAGCCGT
GAAGTTGAGC GTGAATATGC GGTGCGGGTA TTTGGTCAAA TCGATGATGA TAAAATCAAA
CAGTTGAGCC GTGGTGTACA ACTGGAAGAT GGCCCTGCGG CATTTCGTAC TATCAGCTAC
CAGGGTGGTG AAGGGATAAA CCAGTGGTAT AACGTTACGT TGACCGAAGG GCGTAATCGC
GAAGTTCGCC GTCTATGGGA AGCCGTAGGC GTGCAGGTTA GCCGCCTGAT TCGTGTGCGT
TATGGCGACA TTAATTTGCC GAAAGGCCTG CCGCGGGGTG GCTGGACTGA ACTGGATCTT
AAAGCCACTA ACTACCTGCG TGAATTGGTC GAACTGGATG TTGAAACCGT CAGTAAATTA
CCCGTTGAGA AAGATCGTCG CCGGGTTAAA GCCAACCAAA TCCGTCGTGC AGTTAAGCGC
CATACCGAAG TCTCGGGCCG CCAGGTTGCT GGCCGTCAGG GTTCAGCCCG TAAAGGCTCT
ACGCGTCAAA ACGTGGGTAA TGCGGTACCC GCAGCCACGG CAAGTCGCCG TAGTGGCCCG
AAAAAACGCG GTTAA
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| Protein sequence | MSEKSEKQKL PTPNPHTPAK PQGAKIVGEK LQKILARAGH GSRREIEAII QQGRVSVDGK
VSKLGDRVEV TQSTKIRLDG HLLSIKESEE NVCRVLAYYK PEGELCTRND PEGRPTVFDR
LPKLRGSRWV AVGRLDVNTS GLLLFTTDGE LANRLMHPSR EVEREYAVRV FGQIDDDKIK
QLSRGVQLED GPAAFRTISY QGGEGINQWY NVTLTEGRNR EVRRLWEAVG VQVSRLIRVR
YGDINLPKGL PRGGWTELDL KATNYLRELV ELDVETVSKL PVEKDRRRVK ANQIRRAVKR
HTEVSGRQVA GRQGSARKGS TRQNVGNAVP AATASRRSGP KKRG
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