| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2036 |
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| Symbol | |
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| ID | 6087329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2267279 |
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| End bp | 2268325 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641597103 |
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| Product | putative periplasmic protease |
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| Protein accession | YP_001720776 |
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| Protein GI | 170024271 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
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| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.210716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTTAA TTTCTTTGTA CGGGCTGTTT CTGGCTAAAG TGGTGACCAT CGTGGTTGCG
ATTGGTGCAG TAGTGTTATT GGTGGTCAGC CAGGGAATGA GAAGACAAGG GCAACGGGGG
GAATTGAACC TGGTTGATCT GGGGGAACAA TATAAAGAAA CTCAGCGAGA AATGCGGCTG
GCACGCATGA GCCATGCAGA ACAAAAAGCC TGGGTTAAAG AATTTAAAAA GCAGGAAAAA
GCGGATCAAA AACTGAAGAA ACAACGCGCA AAATCGGGTG CGGTGGCGGC AGTAAAACCA
TGTTTATATG TCATTGATTT TAAAGGGAGC ATTGGGGCGC AGGAGGTCTC TTCATTACGT
GAAGAGATCT CTGCTATTTT GGCCGTTGCA ACCGCGCAAG ATGAAGTGTT GCTACGGCTG
GAAAGTCCGG GCGGTGTGGT GCATGGCTAT GGGTTGGCGG CTTCTCAATT AGCGCGCCTG
CGTCAGCGTG GGATCCGCCT GACGGTTGCG GTTGATAAAG TTGCCGCCAG TGGCGGTTAT
ATGATGGCCT GTGTTGCTGA CCGCATTATC TGTGCGCCTT TCGCCATTAT TGGCTCCATT
GGCGTGGTCG CTCAAATTCC GAATTTCCAT CGCTTACTGA AAAAGAACGA CATTGACGTA
GAACTGCATA CCGCAGGTGA ATTTAAACGC ACACTGACGT TGTTTGGTGA GAATACGGAG
CAGGGGCGTG AAAAATTCCG TGAAGATTTA AATGAAACTC ACCTGTTATT TAAACAATTC
GTGCAGCAGC AACGTCCTTC TTTAGATATT GATGCTGTCG CGACGGGCGA GCATTGGTTT
GGTACGCAAG CCAAAGAGAA AGGTTTGGTT GATGCTATCG GCACCAGTGA TGATTTACTG
ATCGCTGAAA TGGATAATCA CGAAGTCATT GGCGTGCGTT ATTCTCATCG TAAACGCCTA
ATAGAGCGTT TTATGGGGAG TGCAACCGAA AGTGTTGACA GCCTATTATT ACGTTGGTGG
CAGCGGGGTG AGAAGCCGCT GCTATAA
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| Protein sequence | MELISLYGLF LAKVVTIVVA IGAVVLLVVS QGMRRQGQRG ELNLVDLGEQ YKETQREMRL
ARMSHAEQKA WVKEFKKQEK ADQKLKKQRA KSGAVAAVKP CLYVIDFKGS IGAQEVSSLR
EEISAILAVA TAQDEVLLRL ESPGGVVHGY GLAASQLARL RQRGIRLTVA VDKVAASGGY
MMACVADRII CAPFAIIGSI GVVAQIPNFH RLLKKNDIDV ELHTAGEFKR TLTLFGENTE
QGREKFREDL NETHLLFKQF VQQQRPSLDI DAVATGEHWF GTQAKEKGLV DAIGTSDDLL
IAEMDNHEVI GVRYSHRKRL IERFMGSATE SVDSLLLRWW QRGEKPLL
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