| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2021 |
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| Symbol | araD |
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| ID | 6087602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 2250943 |
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| End bp | 2251638 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641597088 |
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| Product | L-ribulose-5-phosphate 4-epimerase |
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| Protein accession | YP_001720761 |
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| Protein GI | 170024256 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
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| TIGRFAM ID | [TIGR00760] L-ribulose-5-phosphate 4-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.919407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTCAACG AACTGAAGCA GCAAGTTCTT GCCGCTAATC TTGCTCTACC GCGCCATAAT
CTGGTGACAT TCACTTGGGG TAATGTTAGT GCTATCGATC GCCAAAAGGG TTTACTGGTG
ATTAAGCCTT CAGGTGTGGA ATATGCGTCC ATGACACTGG ATGATATGGT GGTCGTGGAG
TTGGAGAGCG GCAACGTCGT TGAGGGCAGC AAAAAACCAT CATCAGACAC GGATACTCAC
CGCGTGCTGT ATCTTAATTT CCCCCAAATT GGAGGCATAG TGCATACCCA CTCCCGTCAT
GCAACTATTT GGGCGCAGGC GGGGCTAGAC TTGCCTGCTT GGGGGACAAC CCATGCTGAT
TACTTCTATG GATCCATCCC CTGTACCCGT TTGATGACAC ATGAAGAAAT TGCGGGTCGT
TATGAATGGG AAACCGGTAA TGTCATCGTT GATACTTTCC ATGAAAGGGG CATCACCCCA
GATGCTGTAC CTGCGGTGTT GGTGAACTCT CATGGGCCAT TTGCCTGGGG TAGCAGTGCG
GAGAATGCAG TACACAATGC GGTAGTCTTG GAAGAGTTAG CGTATATGGG CATTTTCTCG
CGTCAATTGA ACCCGCAGTT GGGCGATATG CAACCGCAAC TGCTGGATAA GCATTACTTA
CGTAAACATG GCAAGGATGC GTACTACGGC CAATAA
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| Protein sequence | MLNELKQQVL AANLALPRHN LVTFTWGNVS AIDRQKGLLV IKPSGVEYAS MTLDDMVVVE
LESGNVVEGS KKPSSDTDTH RVLYLNFPQI GGIVHTHSRH ATIWAQAGLD LPAWGTTHAD
YFYGSIPCTR LMTHEEIAGR YEWETGNVIV DTFHERGITP DAVPAVLVNS HGPFAWGSSA
ENAVHNAVVL EELAYMGIFS RQLNPQLGDM QPQLLDKHYL RKHGKDAYYG Q
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