Gene YPK_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2011 
Symbol 
ID6087258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2239753 
End bp2240382 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID641597078 
Productelectron transport complex protein RnfG 
Protein accessionYP_001720751 
Protein GI170024246 
COG category[C] Energy production and conversion 
COG ID[COG4659] Predicted NADH:ubiquinone oxidoreductase, subunit RnfG 
TIGRFAM ID[TIGR01947] electron transport complex, RnfABCDGE type, G subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000172244 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAAAAA CAATGAGGCG TCACGGCATC ACTCTCGCAC TGTTTGCTGC CGGTGCCACA 
GGGTTAACTG CGGTTGTTAA CTCACTGACT GAAAACACGA TTGCTCACCA AGCAGCATTA
CAGCAAAAAG CATTGCTGGA CCAAGTCGTC CCGGCAGAAA ATTATGATAA TGACATGCAA
GCAGAATGTT ACGTTGTCAC TGATTCAGCC TTGGGTAATA TGGCTCCCCA TCGCCTGTAC
CTTGCGCGTA AAGGTAACCA ACCGGTAGCT GCCGCAATCG AAACCACAGC ACCAGATGGC
TATTCCGGTG CGATTCAACT GTTGGTCGGT GCAGATTTTC ACGGTAATGT TCTTGGCAGC
CGGGTGATTG AGCATCATGA AACCCCAGGT TTAGGGGATA AAATTGATAT CCGTATCTCT
GATTGGATCA ACCATTTCAG CGGTCAACAC GTAACAGGTG ATGACGATAA GCGTTGGGCG
GTGAAAAAAG ATGGCGGGTC GTTTGATCAG TTTACTGGTG CTACCATCAC ACCACGGGCT
GTCGTGCGGG CAGTAAAAAA TGCGGCACTG TATTTGCAAA CACTGCCACC ACAGCTTAGT
CGCCTGCCCT CCTGTGGAGA AGATCAATGA
 
Protein sequence
MLKTMRRHGI TLALFAAGAT GLTAVVNSLT ENTIAHQAAL QQKALLDQVV PAENYDNDMQ 
AECYVVTDSA LGNMAPHRLY LARKGNQPVA AAIETTAPDG YSGAIQLLVG ADFHGNVLGS
RVIEHHETPG LGDKIDIRIS DWINHFSGQH VTGDDDKRWA VKKDGGSFDQ FTGATITPRA
VVRAVKNAAL YLQTLPPQLS RLPSCGEDQ