| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2007 |
|---|
| Symbol | |
|---|
| ID | 6088169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2234450 |
|---|
| End bp | 2235073 |
|---|
| Gene Length | 624 bp |
|---|
| Protein Length | 207 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641597074 |
|---|
| Product | electron transport complex protein RnfB |
|---|
| Protein accession | YP_001720747 |
|---|
| Protein GI | 170024242 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB |
|---|
| TIGRFAM ID | [TIGR01944] electron transport complex, RnfABCDGE type, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGTCTT TATGGATCGC CATAGGCGCA CTCAGTACAT TGGCGCTGGT CTCCGGCGTG
GTGCTCGGCT TCGCCGCCCG TCGTTTCCAG GTTGATGAAG ATCCGGTCGT CGAGCAAGTG
GATGCCATTT TGCCACAGAG CCAATGTGGG CAATGTGGTT ACCCTGGTTG CCGCCCCTAT
GCCGAGGCGG TCTCTACTGG TGGTGAAAAA ATCAACAAAT GCGCGCCGGG TGGCGAGCAG
GTGATGCTGA AACTGGCCGA ATTATTGGCG GTCGAGCCAC AACCGTTGGA TGGTGATGAA
AGTGCAGCCC ATCCACAACG TAAAGTGGCG TTTATCGATG AAGCAAACTG CATCGGTTGT
ACTAAATGTA TTCAGGCCTG TCCGGTTGAT GCCATCATCG GGGCGACACG GGCTATGCAC
ACCGTATTAT CTGATCTCTG CACTGGCTGC GACCTGTGTG TTGCCCCCTG CCCAACCGAT
TGTATTGAAA TGATCCCGGT TGCTACCACC ACCGCCAACT GGAAATGGGA TTTGAATACC
ATTCCGGTCA AGAATCTGCC TAATCAGTTG GTCGCCTCAC AAATGATTCC GGTAAAAATG
ATAGACGTGG AGCAACATGT TTAA
|
|---|
| Protein sequence | MMSLWIAIGA LSTLALVSGV VLGFAARRFQ VDEDPVVEQV DAILPQSQCG QCGYPGCRPY
AEAVSTGGEK INKCAPGGEQ VMLKLAELLA VEPQPLDGDE SAAHPQRKVA FIDEANCIGC
TKCIQACPVD AIIGATRAMH TVLSDLCTGC DLCVAPCPTD CIEMIPVATT TANWKWDLNT
IPVKNLPNQL VASQMIPVKM IDVEQHV
|
|---|
| |