| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1963 |
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| Symbol | |
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| ID | 6088142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2182149 |
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| End bp | 2183099 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641597032 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001720705 |
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| Protein GI | 170024200 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.074975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAACA GCAAGCATTT CCTTCTCCTT GTCGCCATGA CGTTTGCCAC TGTTTTTTCC
ACCGCGTCGT GGGCCAATAA TGGGTTAATG ACGATCATCA TCAACGATCC CTCTAACCCG
TATTGGTTCA CCGAGGGGCA GGTGGCGAAA GCCACGGCAG AGAAAATGGG GTACAGCGCT
ACCGTGAGTG CCCATAAAGG TGATACCAAT ACCGAAAGCC AGCTTATTGA TACGGCGATA
ACCAACAAAT CAAAAGCGAT TATTCTTGAT CCGGCCAATG CTGACGGCTC AATAGGTTCG
GTAAAAAAAG CCATCGCCGC CAATATCCCG GTATTTATAA TTAACGCTGA ACTCAACCAA
AGCGGCCTTG CCAAAGCACA ACTGGTCTCC AACAATGCGC AGGGTGCCGC GCTGGGTGCC
ATACAGTGGG TTAAAACAGT AGGAGACTCT GGCAAATATG TTGAACTGGT TGGTGCGCCG
TCAGATAACA ACGCCGCCAC CCGGGCCAAC GGCTACAGTA GCGTACTGTC TCAGTATCCA
GACCTCAAAC GGGTCGGTAA AGAAGTGGCT AACTGGGATC GTACTCAGGG ATACAACAAA
ATGCAGTCAA TGCTTCAGGC AAATCCGGAC ATAAAAGGGG TTATCAGCGG GAATGATGAA
ATGGCGCTCG GGGCCATTGC CGCGTTGAAG GAAGCCGGCA AAATCGACCA AGTGAAAGTA
GGGGCGTTTG ATGGTTCACC AGATGCGGTG GATGCCGTGA AAGCCGGTAC GTTGGCTTAT
ACTGTGTTGC AACCGGTCGC TGTTTTTTCA GCAAAAGCCA TTGAACAGGC GGATAATTTC
CTCAAAACCG GTAAAACGGG CGCTCGGGGT GAAAAACAAC TTTTTGACTG TATGTTGATC
ACAAAAGCGA ATGTCGACAA ATATACATCA CCGTTTGTGA TGTCAGAGTA A
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| Protein sequence | MFNSKHFLLL VAMTFATVFS TASWANNGLM TIIINDPSNP YWFTEGQVAK ATAEKMGYSA
TVSAHKGDTN TESQLIDTAI TNKSKAIILD PANADGSIGS VKKAIAANIP VFIINAELNQ
SGLAKAQLVS NNAQGAALGA IQWVKTVGDS GKYVELVGAP SDNNAATRAN GYSSVLSQYP
DLKRVGKEVA NWDRTQGYNK MQSMLQANPD IKGVISGNDE MALGAIAALK EAGKIDQVKV
GAFDGSPDAV DAVKAGTLAY TVLQPVAVFS AKAIEQADNF LKTGKTGARG EKQLFDCMLI
TKANVDKYTS PFVMSE
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