| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1944 |
|---|
| Symbol | |
|---|
| ID | 6088631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2158038 |
|---|
| End bp | 2158790 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 641597013 |
|---|
| Product | fumarate/nitrate reduction transcriptional regulator |
|---|
| Protein accession | YP_001720686 |
|---|
| Protein GI | 170024181 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.755264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCTG AAAAACGCGT TATCCGACGA ATTCAGTCTG GTGGGTGTGC AATTCACTGT
CAGGATTGCA GCATCAGTCA GCTCTGTATT CCGTTTACCT TAAATGAGCA TGAGCTTGAT
CAGCTCGACA ATATCATTGA AAGGAAAAAA CCTATTCAAA AAGGACAGGC GCTGTTTAAA
GCAGGTGATG AACTTAAATC ACTGTATGCT ATCCGTTCTG GGACCATTAA AAGCTACACC
ATTACCGAAG AAGGCGATGA ACAAATTACC GGTTTCCATC TGGCGGGTGA TTTAGTCGGT
TTCGATGCGA TCAGTAATCT GCAACACCCA AGTTTTGCCC AAGCGTTAGA AACATCAATG
GTGTGTGAAA TCCCATTTGA TACCTTGGAT GATCTTTCCG GTAAAATGCC CAATCTGCGC
CAACAGATAA TGCGTTTGAT GAGCGGTGAA ATCAAAGGCG ATCAAGACAT GATCTTGCTG
CTCTCTAAAA AGAATGCGGA AGAGCGCCTG GCCGCCTTTA TCTACAATCT ATCCCATCGT
TTTGCTCAGC GCGGTTTCTC ACCACGTGAA TTTCGCTTGA CCATGACCCG TGGTGATATT
GGTAACTATT TAGGCCTGAC AGTGGAAACG ATTAGCCGCT TACTGGGGCG TTTCCAGAAA
AGCAATATTC TCAGCGTGAA AGGAAAATAC ATCACGATTG AGAATAACGA AGCACTGGCT
CAGTTGGCAG GTAACCCAAA ACCTCGGCTA TAG
|
|---|
| Protein sequence | MIPEKRVIRR IQSGGCAIHC QDCSISQLCI PFTLNEHELD QLDNIIERKK PIQKGQALFK
AGDELKSLYA IRSGTIKSYT ITEEGDEQIT GFHLAGDLVG FDAISNLQHP SFAQALETSM
VCEIPFDTLD DLSGKMPNLR QQIMRLMSGE IKGDQDMILL LSKKNAEERL AAFIYNLSHR
FAQRGFSPRE FRLTMTRGDI GNYLGLTVET ISRLLGRFQK SNILSVKGKY ITIENNEALA
QLAGNPKPRL
|
|---|
| |