| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1943 |
|---|
| Symbol | |
|---|
| ID | 6088632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2156947 |
|---|
| End bp | 2157903 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641597012 |
|---|
| Product | universal stress protein UspE |
|---|
| Protein accession | YP_001720685 |
|---|
| Protein GI | 170024180 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.361169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAGT ATCAGAATAT TCTGGTTGCT ATCGACCCCA ATCAGGATGA TCAACCTGCA
TTAAGACGCG CGGTTTATCT TGTGCAACGC AATGGTGGCA CAATCAAAGC ATTTTTAGCT
ATCTATGACC TGTCATATGA TATGACCACC TTGCTATCAC CGGATGAACG CACAGCGATG
CGTAAAGGGG TTATCAGCCA GCGTTCAGCT TGGATCAGTG AACAGTGCCG TTTTTATATC
GACTCGGGTA TCCCCATTGA TATAAAAGTG GTGTGGCATA ATCGGCCATA CGAAGCCATT
ATTCAGGAAG TTCTGAAGGC GAAGCACGAT TTATTGCTAA AAATGGCACA TCAACACGAT
CGCCTAGAAT CAATTATCTT TACGCCAACT GATTGGCATT TATTACGTAA ATGTCCATGC
CCGGTGTGGA TGGTAAAAGA TCAGCCATGG CCAGAAGAAG GTACCGCGCT GGTGGCGGTG
AATCTCTCAA GTGAAGATCC ACTACATGAC CCGCTTAATT TACGCTTAGT CAAAGAAACC
CTTGAGCTGG CAGAACATGT CAACCAAACA CCCGTTCATC TGATTAGCGC CTACCCAGTG
ACCCCAATAA ATATCGCCAT TGAATTACCT GATTTTGACC CGAGTGTCTA TAACGATGCT
ATTCGTGGTC AGCATTTGGT GGCGATGAAA GCATTGCGCC AACAGTTTGG TATTGATGAA
AAATTCACTC ATGTGGAGAA AGGCTTACCT GAAGAGGTGA TCCCTGACTT GGCTGAACAC
CTGAATGCTG GGGTGGTGGT TTTGGGGACA TTGGGCCGTA CCGGTTTATC TGCGGCCTTT
ATCGGTAATA CAACTGAGCA TGTGATCGAT AATTTGAAAT GTGATTTGCT GGCGATTAAG
CCAGAAGGAT TTACCTGCCC GATAGAAGGC AATGAAGATC AGGAGGATGC TGAGTAA
|
|---|
| Protein sequence | MGKYQNILVA IDPNQDDQPA LRRAVYLVQR NGGTIKAFLA IYDLSYDMTT LLSPDERTAM
RKGVISQRSA WISEQCRFYI DSGIPIDIKV VWHNRPYEAI IQEVLKAKHD LLLKMAHQHD
RLESIIFTPT DWHLLRKCPC PVWMVKDQPW PEEGTALVAV NLSSEDPLHD PLNLRLVKET
LELAEHVNQT PVHLISAYPV TPINIAIELP DFDPSVYNDA IRGQHLVAMK ALRQQFGIDE
KFTHVEKGLP EEVIPDLAEH LNAGVVVLGT LGRTGLSAAF IGNTTEHVID NLKCDLLAIK
PEGFTCPIEG NEDQEDAE
|
|---|
| |