| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1941 |
|---|
| Symbol | pntA |
|---|
| ID | 6089106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2153846 |
|---|
| End bp | 2155372 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641597010 |
|---|
| Product | NAD(P) transhydrogenase subunit alpha |
|---|
| Protein accession | YP_001720683 |
|---|
| Protein GI | 170024178 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3288] NAD/NADP transhydrogenase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00561] NAD(P) transhydrogenase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.279154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATTG GTGTACCAAG AGAGCGGTTG GCCAATGAAG CCAGGGTTGC AGCAACGCCG
AAAACGGTGG AACAATTGCT GAAATTAGGC TTCACCGTGG CAATTGAAAG TGGAGCGGGG
CATTTAGCCA GCTTTGACGA TGCGGCGTAC CAAGAAGCGG GTGCCATCAT TACGGATACC
ACTGATGTGT GGCAATCCGA TCTTATCCTG AAGGTGAATG CTCCCTTTGA GGATGAAATT
GCGCTGATGC GTGAGGGGAG CACGTTGGTC AGTTTTATTT GGCCCGCTCA GAACCCTGAG
TTGCTGCAAA AACTGGCAGA GCGTCAAGTT ACTGCATTAG CGATGGATTC AGTGCCGCGT
ATCTCCCGTG CGCAATCCAT GGATGCCCTC AGCTCCATGG CAAATATTGC CGGTTACCGT
GCCATTGTTG AAGCGGCTCA TGAATTTGGC CGTTTCTTCA CCGGGCAGAT CACCGCGGCG
GGTAAAGTTC CACCTGCGAA GGTGATGGTT ATTGGTGCCG GAGTCGCTGG TCTGGCGGCT
ATCGGTGCGG CGGGGAGCCT CGGGGCTATC GTGCGTGCTT TTGACACCCG TCCTGAAGTA
AAAGAACAAG TCCAGAGTAT GGGCGCTGAA TTCCTTGAAT TGGATTTTGA AGAGGAGGCG
GGCAGTGGCG ATGGTTACGC CAAAGTGATG TCCGAGGCTT TTATCAAAGC TGAGATGGAA
CTGTTTGCCG CGCAAGCCGC AGAAGTGGAC ATTATCGTCA CTACCGCGCT GATCCCTGGT
AGACCAGCAC CGCGCCTGAT CACCAAAGAG ATGGTGGCGT CGATGAAATC GGGCAGCGTG
ATTGTCGATC TGGCGGCTCA GACAGGCGGT AACTGTGAGT TGACGGTGGC TGATAACGTC
ACCATCACGG AAAATGGCGT AAAAATCATT GGCTATACAG ACCTGCCAAG CCGTTTACCA
ACGCAGTCTT CACAGCTCTA TGGTACTAAC CTCGTTAACT TATTGAAGTT ACTTTGCAAA
GAGAAAAACG GCGAGATCGA TATTGATTTC GACGATACCG TGATTCGCGG TGTTACTGTG
GTTAAAACTG GCGAAGTGAC TTGGCCTGCA CCACCTATTC AGGTTTCAGC TCAGCCGCAG
GCTGCCAAAG CGGCCCCAAT AGTGAAGGAA GAAACGAAGC CCTCATCACC GTGGACCAAA
TACATCATTA TGGCGGTTGC TATGGTGTTG TTTGGTTGGT TGGCGAATGT GGCACCACCA
GAATTCTTGT CTCACTTTAC GGTCTTTGCA CTGGCGTGTG TAGTCGGTTA CTACGTGGTA
TGGAATGTCA GTCATGCGCT GCATACACCG CTGATGTCAG TCACTAACGC GATTTCGGGC
ATTATTGTGG TTGGCGCGTT GTTGCAGATT GGTCATGGTG GCTGGGTAAG TTTCTTCTCC
TTTATTGCCG TACTGATTGC TAGCATCAAC ATTTTTGGTG GCTTCACTGT CACCCAGCGC
ATGCTGAAAA TGTTCCGTAA AAACTAA
|
|---|
| Protein sequence | MRIGVPRERL ANEARVAATP KTVEQLLKLG FTVAIESGAG HLASFDDAAY QEAGAIITDT
TDVWQSDLIL KVNAPFEDEI ALMREGSTLV SFIWPAQNPE LLQKLAERQV TALAMDSVPR
ISRAQSMDAL SSMANIAGYR AIVEAAHEFG RFFTGQITAA GKVPPAKVMV IGAGVAGLAA
IGAAGSLGAI VRAFDTRPEV KEQVQSMGAE FLELDFEEEA GSGDGYAKVM SEAFIKAEME
LFAAQAAEVD IIVTTALIPG RPAPRLITKE MVASMKSGSV IVDLAAQTGG NCELTVADNV
TITENGVKII GYTDLPSRLP TQSSQLYGTN LVNLLKLLCK EKNGEIDIDF DDTVIRGVTV
VKTGEVTWPA PPIQVSAQPQ AAKAAPIVKE ETKPSSPWTK YIIMAVAMVL FGWLANVAPP
EFLSHFTVFA LACVVGYYVV WNVSHALHTP LMSVTNAISG IIVVGALLQI GHGGWVSFFS
FIAVLIASIN IFGGFTVTQR MLKMFRKN
|
|---|
| |