Gene YPK_1910 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1910 
Symbol 
ID6088365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2116330 
End bp2117334 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content41% 
IMG OID641596981 
Producthypothetical protein 
Protein accessionYP_001720654 
Protein GI170024149 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.810251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGTAT CTATAACACT TCCGTCTGCA TTGTTAATGG CGGTCTTCAC ATTCAATGCA 
GAAGCCAATG TGCCCAAAAT GCCTGCTGAT TGGCACGGTG GTGAGATTTC TGGCCCACCA
CAGGCGCCAA ATGCCTGTGG TGAAGCACCA GATATTTCGC GAATAAAAAA TAAGTACTTA
GATGTCAGTT ATGCTAATAC ATCACCATCA GAAAAAATGG ATATATTCCT CCCTGAACAG
TGGAAATTGC GTTATCCAGT TATTATTAAT GTTCATGGCG GGGCATTTTT TGGTTGTGAC
AAAATGGATA ACCAGTTAAT GCCTGCTCTT TATGGCCTTT CTAAAGGTTA TGCTGTCGTG
AATATTAATT ATCGTTTAAG TCCAGAAGCA GCCTGGCCTG CGCAGATTAA CGATCTCAAA
GCGGCCATAA AATTTGTTAG AGCCAACGCC ATAAAATATA ATTTTGACCC AGATAATATT
ATTTTGATGG GGGGGTCTGC TGGGGGGAAT CTTGTTGCCT TGGCTGGGGT TTCCGGCGAT
GTAAAATCCC TGGAGGATCC AAAATTAGGT TATCCAGATG TATCAACCAA AGTGCAAGCT
GTTATTGCAT GGTACCCACC CATTGACTTT TTAACAATGG ATGAGCAATG GAAAAAAATT
GGTATTGACG GACAGAAACA TTCAACAGAG AATTCTTTTG AATCTTTCCT TATGCGGGAA
AAAATTACCC AAGTAGATAA ATCCCGAATG TCCACCACCA ATCCGATGAA TTATATTACC
GCGGATGCCC CACCATTCTT AATTCAACAT GGTTACCAAG ACAGTACTAT TCCTCGGTTA
CAAAGCCAAC TTTTTGCGGC CAAGCTCGCT AGCGCCATAG GTAGTGATAA TGTAGAATAT
AACCTACTGA TGGGTGCAGA ACATGCCGAT GATAAGTATT TTCATTCTAA TAACAATTTG
GAACGTAACT ACCAGTTCCT TGCCCGCCAT ATTCATAGCC AGTAA
 
Protein sequence
MKVSITLPSA LLMAVFTFNA EANVPKMPAD WHGGEISGPP QAPNACGEAP DISRIKNKYL 
DVSYANTSPS EKMDIFLPEQ WKLRYPVIIN VHGGAFFGCD KMDNQLMPAL YGLSKGYAVV
NINYRLSPEA AWPAQINDLK AAIKFVRANA IKYNFDPDNI ILMGGSAGGN LVALAGVSGD
VKSLEDPKLG YPDVSTKVQA VIAWYPPIDF LTMDEQWKKI GIDGQKHSTE NSFESFLMRE
KITQVDKSRM STTNPMNYIT ADAPPFLIQH GYQDSTIPRL QSQLFAAKLA SAIGSDNVEY
NLLMGAEHAD DKYFHSNNNL ERNYQFLARH IHSQ