| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1906 |
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| Symbol | |
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| ID | 6088316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2111963 |
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| End bp | 2113579 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641596977 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001720650 |
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| Protein GI | 170024145 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACTATT TTCGTTATGC ATTATGTGCC GTAGTAGTCG GTTCAGTACT GGGAGCGGCA
AATGCGGCTG AGGTCCCTCC TGGAACGGTA TTGGCTGAAA AACAAGAAAT TGTTCGGCAT
ATTAAAGATG AGCCAGCATC GCTGGATCCA ATGAAAGCCG TTGGGTTGAT AGAGGCTCAG
GTGGTACGGG ATCTGTTTGA AGGTCTGGTT AATCAAGATG CCCATGGGCA GCCTATTCCC
GGTGTCGCAT TGAGCTGGAA AACAGCAGAT AACCAAACCT ATATCTTCAC CTTACGTAAA
GATGCGAAAT GGTCCAATGG TGAACCTGTC ACTGCGCAAG ATTTTGTCTA CAGCTGGCGT
CGCTTGGTCG ATCCTAAAAG TTTGTCTCCG TTTGCCTGGT TTGCAGAACT GGCCGGAATG
GAGAATGCGC AACAGATTAT TTCCGGTCAA ATGCCACCGG AAGCACTGGG TGTGAGCGCG
ATTGATCATT ACACCCTGAA AGTTAAACTC AGTAAACCCG TTCCTTATTT CCCAAGCCTG
ACCGCAAATT TCAGTTTATT CCCCGTGCCA CAATCTGTTA TTGAAAAATA TGGTAACAAT
TGGACTAAGG TCGGTAATTT GGTCGGTAAC GGTGCATTTA AATTACAAGA CCGAGTCGTT
AATGAAAAGT TAGTGTTTGT TCCTAATGAG TATTATTGGG ATCATGGACG TACTGTTCTG
ACCAAAGTAA CCTTTGTTCC CATTAGCCAA GAAGCGAATG CTACCAAACG CTATCTGGCA
GGGGATATTG ATATTACGGA GTCATTCCCG AAGAATTTAT ATCAAAAACT GTTAAAGGAT
ATTCCTGATC AAGTTTATAC CCCGGATCAG TTAGGGACTT ATTATTATGC TTTTAATACT
CAACGCGCGC CGACCAATGA TGTTCGGGTA CGTAAAGCAT TATCTTATGC GATAGATCGA
AAAATTATTG CTGAGAAGGT ATTAGGTACC GGAGAAAAAC CCGCTTATCA CTTTACCCCA
GATGTCACCG CAGGCTATGA ACCGGCGGCG AGTTTATTGC AGCAACAGAG CCAAGAGGAG
TTAAATGCTC AAGCCAAATC TTTGCTTCAT GCCGCGGGCT ATGGCCCAGA TAAACCGTTA
ACACTGACCT TGCTGTATAA CACCTCCGAT AATAACCAGA AGTTGGCTAT TGCTATCGCA
TCGATGTGGA AAAAGACCTT GGGAATCGAT GTGAAAATGG TCAATCAAGA ATGGAAAACC
TATATTGATA GCCGTAATAC CGGTAATTTT GATGTCGTGC GAGCATCATG GATAGGTGAT
TATAATGAGC CATCAACTTT TCTGTCGTTA TTAACATCCA GGCATAGCGG GAATATTGCC
AAATTCAATA ATGCGGATTA CGATCGTTTA CTGGCCGATG CGGGTAAGCA GACAAACGCT
AAAGCACTGA GTGCTGATTA TAATAAAGCC GAGCAAATTA TTGCGGAACA GGTCCCTATC
GCACCGATAT ATCAATTTAC TAATGGCCGT TTAATTAAAT CCTGGGTGAA AGGTTACCCG
ATAACCAATC CAGAAGATGT TGCTTACAGT CAGAACTTAT ATATTATTAA GCACTGA
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| Protein sequence | MHYFRYALCA VVVGSVLGAA NAAEVPPGTV LAEKQEIVRH IKDEPASLDP MKAVGLIEAQ
VVRDLFEGLV NQDAHGQPIP GVALSWKTAD NQTYIFTLRK DAKWSNGEPV TAQDFVYSWR
RLVDPKSLSP FAWFAELAGM ENAQQIISGQ MPPEALGVSA IDHYTLKVKL SKPVPYFPSL
TANFSLFPVP QSVIEKYGNN WTKVGNLVGN GAFKLQDRVV NEKLVFVPNE YYWDHGRTVL
TKVTFVPISQ EANATKRYLA GDIDITESFP KNLYQKLLKD IPDQVYTPDQ LGTYYYAFNT
QRAPTNDVRV RKALSYAIDR KIIAEKVLGT GEKPAYHFTP DVTAGYEPAA SLLQQQSQEE
LNAQAKSLLH AAGYGPDKPL TLTLLYNTSD NNQKLAIAIA SMWKKTLGID VKMVNQEWKT
YIDSRNTGNF DVVRASWIGD YNEPSTFLSL LTSRHSGNIA KFNNADYDRL LADAGKQTNA
KALSADYNKA EQIIAEQVPI APIYQFTNGR LIKSWVKGYP ITNPEDVAYS QNLYIIKH
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