| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1882 |
|---|
| Symbol | |
|---|
| ID | 6088669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 2087821 |
|---|
| End bp | 2088681 |
|---|
| Gene Length | 861 bp |
|---|
| Protein Length | 286 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641596953 |
|---|
| Product | pyridoxamine kinase |
|---|
| Protein accession | YP_001720626 |
|---|
| Protein GI | 170024121 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2240] Pyridoxal/pyridoxine/pyridoxamine kinase |
|---|
| TIGRFAM ID | [TIGR00687] pyridoxal kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA TACTTTCTAT TCAGTCACAC GTCGTTTTTG GCCACGCAGG GAATAGCGCT
GCAGAATTTC CTATGCGTCG TATGGGGGTG AATGTCTGGC CGCTGAATAC CGTTCAGTTT
TCGAATCATA CTCAATATGG TCACTGGACA GGTTGTGTCA TGCCCGCTAG CCATTTAACT
GACATTGTGC AAGGCATTGC CGATATCGAT CGACTGAAAG ACTGTGATGC GGTTCTGAGT
GGCTATATTG GGTCGCCAGA ACAGGGCAGT CATATTCTGG CCGCCGTCGC CCAGGTTAAA
CAAGCCAATC CAGATGCTTG GTATTTTTGT GATCCGGTCA TGGGGCACCC CGAAAAAGGG
TGTATTGTGG CACCGGGGGT GGCCGAATTT TTCTGCAACG AAGCTTTGCC TGCCAGTGAT
ATGATTGCGC CGAACCTGCT TGAACTTGAG CAACTCAGTG GTGAGCGAGT AGAGAATGTC
GAACAGGCGG TACAGGTTGC CCGTTCTCTT TGCGCTAGGG GGCCAAAAGT CGTGTTAGTC
AAGCACCTGA GCCGTGCAGG CTACCATGCT GACTGCTTCG AAATGTTATT GGTTACCGCA
GATGATGCCT GGCATATCAG CCGCCCGCTG GTGGATTTTG GCAAACGTCA ACCGGTTGGT
GTCGGTGATT TAACCAGTGG TTTATTGCTG GTGAATTTGT TGAAAGGTGA GCCATTGGAT
AAAGCACTGG AACATGTCAC CGCCGCCGTG TATGAAGTGA TGCTCAAAAC ACAGGAAATG
GGGGAGTATG AGCTACAGGT TGTTGCTGCC CAAGAGACTA TTGTGACGCC TATCTGCCAG
TTTACAGCGG TTAGGCTGTA A
|
|---|
| Protein sequence | MKNILSIQSH VVFGHAGNSA AEFPMRRMGV NVWPLNTVQF SNHTQYGHWT GCVMPASHLT
DIVQGIADID RLKDCDAVLS GYIGSPEQGS HILAAVAQVK QANPDAWYFC DPVMGHPEKG
CIVAPGVAEF FCNEALPASD MIAPNLLELE QLSGERVENV EQAVQVARSL CARGPKVVLV
KHLSRAGYHA DCFEMLLVTA DDAWHISRPL VDFGKRQPVG VGDLTSGLLL VNLLKGEPLD
KALEHVTAAV YEVMLKTQEM GEYELQVVAA QETIVTPICQ FTAVRL
|
|---|
| |