| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1880 |
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| Symbol | |
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| ID | 6087676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2085488 |
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| End bp | 2086210 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641596951 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001720624 |
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| Protein GI | 170024119 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.863598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTGTGA TTCTGTGGCG GCGAGGGCAG AATGATAACC ACAGCTTTCC TGCGCGTTAC
AGAGTTTATA TGACTGAGAA TAATGAGTTT GATGTTGCAG ACTTGCGTCG TGAGTATATT
CGGGGTGGTC TGCGCCGCAG TGATTTAACT GAAAACCCTT TAGAATTATT CGAGCGCTGG
TTAAAACAGG CATGTGAAGC TCGCTTGCCC GATCCGACCG CAATGTGTGT GGCTACCGTT
GATATCAATG GTCAGCCCTA CCAGCGTATC GTGCTCTTGA AACATTATGA TGATCAGGGC
TTAGTGTTTT ACACTAATTT AGGTAGCCGC AAAGCACAAC AATTGGCTGA GAACCCGCAT
ATCAGCCTAT TGTTTCCCTG GCATATGCTG GATCGGCAAG TGATTTTCCT CGGCAAGGCG
GAGCGCCTCT CCACATTGGA AGTCCTGAAG TATTTCCATT CCCGTCCGAA AGACAGTCAA
ATTGGTGCTT GGGTTTCCCA GCAATCCTCA CGTATTTCTG CTCGTGGTGT CCTGGAAAGC
AAATTTCTTG AGCTGAAACA AAAATTCCAG CAGGGTGACG TACCGCTGCC CAGTTTTTGG
GGCGGGTTTC GCGTCAAATT CGATTCCGTT GAGTTTTGGC AGGGGGGGGA ACATCGCCTT
CATGACCGTT TTATCTATCA ACGGGAAGCC GACGCGTGGA AAATTGACCG TTTAGCCCCT
TAG
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| Protein sequence | MIVILWRRGQ NDNHSFPARY RVYMTENNEF DVADLRREYI RGGLRRSDLT ENPLELFERW
LKQACEARLP DPTAMCVATV DINGQPYQRI VLLKHYDDQG LVFYTNLGSR KAQQLAENPH
ISLLFPWHML DRQVIFLGKA ERLSTLEVLK YFHSRPKDSQ IGAWVSQQSS RISARGVLES
KFLELKQKFQ QGDVPLPSFW GGFRVKFDSV EFWQGGEHRL HDRFIYQREA DAWKIDRLAP
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