Gene YPK_1812 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1812 
Symbol 
ID6087728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2011447 
End bp2012340 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content47% 
IMG OID641596880 
ProductABC-3 protein 
Protein accessionYP_001720556 
Protein GI170024051 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1108] ABC-type Mn2+/Zn2+ transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0136745 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATATGC TGTTCAGTTT GATCAGTGAG CCATTCGCCT ACCCCTTTAT GCAGCGGGCA 
ATTGTCGCGG CAATCGTCAC TGGTGTGGTC TGCGCGATAC TCTCTTGCTA CCTGGTACTC
AAAGGGTGGT CGCTAATGGG AGATGCTATT TCTCATGCTG TGCTGCCAGG GATTGTTCTG
GCTTTTTGGC TCGGTATCCC TCTGGTCATC GGCGCTTTTG TCTCAGGGAT ATTTTGTGCC
GTGGCAACTG GCTATTTAAA AGAAAACAGC CGGGTTAAAG AAGATACCGT CATGGGGATT
GTTTTTTCTG GCATGTTCGC GTTCGGCTTA GTGCTGTTCT CCCGTATAGA TACTGACCAG
CACCTCAGCC ACATTTTGTT CGGTAACATG CTGGGGATTT CGCTGACAGA ACTGAAACAG
ACCCTGTGGA TCGCAGGTTT CACGCTATTG GTGGTGTTAC TAAAGCGCAA AGACTTTATG
TTGTACTGTT TCGATCCAAA CCATGCGCGG GTTATCGGGC TACCCGTTAA GTTTCTGCAT
TACGGTTTAC TTTGCTTACT GGCATTGACT ATCGTCGCGT CATTGCAGGC AGTTGGCGTT
ATTCTCGTCA TCGCCATGTT GATAGCGCCG GGTATTATCG CCTTTATGAT TTGTCGTAGT
TTTGATCAAA TGCTGGTTGT CGCGACACTG GTTTCAGTGG TCGCCTGTGT TTTAGGTACA
TTAATCAGTT TTCATATTGA TGGTGCAACA GGCCCATGCA TCGTGATTAT TCAAGCTTTA
TTCTTTGTTG TCGCCCTCAT TTACAACCAT ATAAAACCGA TTAAAGACCG AAAAATGGCA
CCACTCACCA AGGCAGTAAA TCCAGAAAAT ACAGCCCCAA GTAACCTGCC ATAG
 
Protein sequence
MNMLFSLISE PFAYPFMQRA IVAAIVTGVV CAILSCYLVL KGWSLMGDAI SHAVLPGIVL 
AFWLGIPLVI GAFVSGIFCA VATGYLKENS RVKEDTVMGI VFSGMFAFGL VLFSRIDTDQ
HLSHILFGNM LGISLTELKQ TLWIAGFTLL VVLLKRKDFM LYCFDPNHAR VIGLPVKFLH
YGLLCLLALT IVASLQAVGV ILVIAMLIAP GIIAFMICRS FDQMLVVATL VSVVACVLGT
LISFHIDGAT GPCIVIIQAL FFVVALIYNH IKPIKDRKMA PLTKAVNPEN TAPSNLP