Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1775 |
Symbol | |
ID | 6088683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1970518 |
End bp | 1971270 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641596843 |
Product | chaperone protein |
Protein accession | YP_001720519 |
Protein GI | 170024014 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.241363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAAAT ATCACTTATT ATCTAAATTG ATATTATCCT TTATTTTGCT ACCCATCGCC CCTCTACATG CTGCTGTTTC CGTATTAATT TGGCCCATTG ACCCAGTCAT TAACGATGAC GAAAATGCCA CAGCATTATG GCTGGAAAAT AAAGATAGCC AACCAACTTA TATGCAAATA CGGGTACTGA GTTGGCGACA GGTTAATGGT CTGGACGACT ACAACGCTCA GACTGCCATT ATTGCCAGCC CCCCCGTTGC CAATATTCAA CCAGGCAAGC GCCAACTGAT TCGCTTAGTT AAGAATGCAC AAGTTCCTGC GGGAAAAGAG CTGGCCTACC GGATATTAAT CGATGAGATC CCCCGTCAGG AACCTAATGA TAAAAATAAC CCGTCATCAA CACAATTGGG TCTGACATTT CAAATGCGCT ATTCCGTGCC CCTATTTGTT TATGGGAATG GTATGCAGAT AGCACCCGAG GCGACACAAC CGACTGATAT TGCACAACCT ACGCTCAGCT ATATATTGAA TCGGCAACAG GGGAAGCAAT GGCTGACGAT CCGCAATCAA AGTGAAATTC ATGCACGTAT TTCTCAGGTC ACACTCAACG GCCAGACGGT TAACAACGGC TTATTGGGCT ATGTATTAGC GAGATCACAG ATGAGCTTTC CCATCAGCTT AGCCGCCAGA AAAGGTGAGT TGGCGGCCAT TATCAATAGC AACACCAAAC CAGTAACTAT TCCATATCAG TAA
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Protein sequence | MIKYHLLSKL ILSFILLPIA PLHAAVSVLI WPIDPVINDD ENATALWLEN KDSQPTYMQI RVLSWRQVNG LDDYNAQTAI IASPPVANIQ PGKRQLIRLV KNAQVPAGKE LAYRILIDEI PRQEPNDKNN PSSTQLGLTF QMRYSVPLFV YGNGMQIAPE ATQPTDIAQP TLSYILNRQQ GKQWLTIRNQ SEIHARISQV TLNGQTVNNG LLGYVLARSQ MSFPISLAAR KGELAAIINS NTKPVTIPYQ
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