Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1705 |
Symbol | |
ID | 6087319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1890477 |
End bp | 1891016 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641596775 |
Product | hypothetical protein |
Protein accession | YP_001720451 |
Protein GI | 170023946 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACAAAT CAATGTTAGC CGGTGTGGGG ATTGGTATTG CCGCCGCTCT GGGAATTGCT GCAGTGGCGA ATATAGATGT CTTCTCCAGT GCACCACAAT ATGCCAAAGT GCTTACTGCA ACCCCGATAA AAGAGACCAT CAAAACGCCT CGTCAAGAGT GCCGTAACGT GACAGTGACG CACCGCAAAC CAGTACAAGA CGAAAATAAG ATCGCAGGCT CAGTTTTGGG GGCAGTCGCA GGTGGGGTGT TGGGGCATCA GGTCGGTGGT GGCCGTGGTA AGGATATCGC TACCGTAGCG GGTGCGTTAG CGGGAGGATA TGCAGGTAAT CGTGTGCAAA ATAATATGCA GGAAAATGAT ACCTATACCA CAACCCAACA GCGTTGCCAG ACCGTGTATG ACAAATCACA GAAGACGCTG GGATATGACG TAACCTACAA AATTGGCGAT CAGCAGGGAA AAATTCGTAT GGATCGTGAT CCAGGTATGC AGATCCCCAT TGATAAAAAT GGTCAACTGG TGCTGAACAA CCGAGCGTAA
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Protein sequence | MNKSMLAGVG IGIAAALGIA AVANIDVFSS APQYAKVLTA TPIKETIKTP RQECRNVTVT HRKPVQDENK IAGSVLGAVA GGVLGHQVGG GRGKDIATVA GALAGGYAGN RVQNNMQEND TYTTTQQRCQ TVYDKSQKTL GYDVTYKIGD QQGKIRMDRD PGMQIPIDKN GQLVLNNRA
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