Gene YPK_1691 details

Gene Information

• Locus tag: YPK_1691
• Symbol: tmk
• ID: 6087671
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1877226
• End bp: 1877864
• Gene Length: 639 bp
• Protein Length: 212 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641596761
• Product: thymidylate kinase
• Protein accession: YP_001720437
• Protein GI: 170023932
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0125] Thymidylate kinase
• TIGRFAM ID: [TIGR00041] thymidylate kinase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0210927
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAGTA AATTTATCGT TATTGAAGGG CTTGAAGGGG CAGGGAAAAC CACCGCCCGC 
GACACCGTGG TCGCGGTGCT GCGTGCCCAA GGGATTAACG ATATCGTTTT TACCCGTGAG 
CCGGGGGGAA CCCCTTTAGC GGAAAAACTG CGTGATTTGA TTAAGCAAGG TATTGACGGT 
GAGGTCCTGA CGGATAAAGC CGAGGTATTA ATGCTGTATG CCGCCAGGGT GCAATTAGTA 
GAAAATGTCA TCAAGCCAGC ACTGGCGCGT GGCAGTTGGG TTGTGGGTGA CCGCCATGAT 
TTGTCATCAC AGGCATATCA GGGCGGGGGG CGAGGGATTG ACAGCCAACT TATGGCCTCG 
TTACGTGACA CGGTGTTAGG CGAATTCCGG CCAGACCTGA CCTTATATTT GGATCTGCCA 
CCGGCTGTGG GTTTGGCGCG AGCCCGTGCG CGCGGTGAAT TGGATCGTAT CGAACAAGAG 
TCACTGGCGT TTTTTGAGCG AACCCGCGCA CGTTACCTTG AATTGGCCGC CAGTGATGCC 
AGTATTAAAA CGATTGATGC CTCCCAACCC ATTGAACAAG TTAGTGCGTC GATAAGCCAG 
GCGCTCGCTC AGTGGCTGAC CAATCAGGAA CCCGTGTAA 

 

Protein sequence

MNSKFIVIEG LEGAGKTTAR DTVVAVLRAQ GINDIVFTRE PGGTPLAEKL RDLIKQGIDG 
EVLTDKAEVL MLYAARVQLV ENVIKPALAR GSWVVGDRHD LSSQAYQGGG RGIDSQLMAS 
LRDTVLGEFR PDLTLYLDLP PAVGLARARA RGELDRIEQE SLAFFERTRA RYLELAASDA 
SIKTIDASQP IEQVSASISQ ALAQWLTNQE PV